Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2838 |
Symbol | |
ID | 1221686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3052614 |
End bp | 3053114 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239240 |
Product | type 2 peroxiredoxin protein |
Protein accession | NP_520959 |
Protein GI | 17547557 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.15733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCAGC CCGGCCAGCC GCTGCCCGAC GCGACGCTCT ACGAATACTT CGAAGTGGAA AAGGACGGCT GCGCGCTCGG GCCCAATGCC TTCTCGGCAG CGGATCTGGC CCAGGGCAAG ACGATCCTCA TCTTCGGCCT GCCTGGCGCC TTCACGCCGA CCTGCTCGGC GCGCCACGTG CCCGGCTATC TCGCCCACTA CGATGCGCTG CGCACCAAGG GTGTCGACGA GATCTGGTGC GTGTCGGTCA ACGACGCCTT CGTGATGGGA GCCTGGGCGC GCGCGCAGGG CACTGACGGC AGGGTTCGCA TGCTGGCGGA CGGCAGCGCC GAATTCACGC GCAGGCTCGG TCTCGAGCAA GACCTGTCCA AGCGCGGCAT GGGCGTGCGT TCGCAGCGCT ACGCCATGAT CGTCAAAAAC GGTGTGGTAA CCGTGCTACA GGTGGAGGCC CCGGGGCAGT TCGCCGTCAG CAATGCGGAA TCGATGCTGG CGCGTCTCTG A
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Protein sequence | MIQPGQPLPD ATLYEYFEVE KDGCALGPNA FSAADLAQGK TILIFGLPGA FTPTCSARHV PGYLAHYDAL RTKGVDEIWC VSVNDAFVMG AWARAQGTDG RVRMLADGSA EFTRRLGLEQ DLSKRGMGVR SQRYAMIVKN GVVTVLQVEA PGQFAVSNAE SMLARL
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