Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2824 |
Symbol | |
ID | 1221672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3036995 |
End bp | 3038272 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637239226 |
Product | hypothetical protein |
Protein accession | NP_520945 |
Protein GI | 17547543 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000593821 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0984639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACTCCT GGCCGTTATG GGCGCAGCTC GGCGCCGTCG TGCTGCTGCT GTGCTGCTCC GCCTTCTTCT CGATCTCCGA GACCAGCCTG ATGGCGCTCA ACCGCCATCG CCTGCGCCAC CTCGCCAAAT CCAACGTCGC CGGCGCGCGC CGCACGCAGG GCCTGCTGGG CCAGACCGAT AAGCTGCTGT CGCTGATCCT GATCGGCAAC AACCTGATCA ATACCGCAGT GCCGGTGCTG ATCGCCAACC TGGCCATCCA TTACTTCGGC AACAGCGGCA CCACGCTGTC GATCGCCACG GCCATCGTCG CCTTCCTGAT CATCGTGTTC TGCGAGATCG CGCCGAAAAT CGCCGGCGCG ACGTATCCCG AGCGGATCTC GTTTCCGGCC AGCTTCATCA TCGCGCCACT GCTGAGGCTG GCGACACCGC TGGTGACCGT CGTCAATGCG TTCGTCACGG TGCTGCTGCG GCTGGTGCGC ATCAACCCGC GCCAGGCGCC CGAGCAGAGG ATGTCGGCCG AGGAGCTGCG CACGCTGGTG CTGGAATCGG GCAATTTCAT TCCGCACAAG CACCGCAGCA TCCTGCTCAA CCTGTTCGAC CTGGACGCCA TCACCGTGGA CGACGTGATG ACGCCGCGCG CGCGGGTGGA ATCGCTGGAC CTGTCGCGGC CCATCGAAGA GGTGATCCAG CAGTTGGAGA CCTGCTACCA CAACAAGCTC CCCGTGTTCG AGCAGGACAC CGACCAGGTG CTCGGCATCC TGCACGTGCG CAAAGCCCTG TCGCTGCTGG GCCATGCGGA GCTCATCCAC GACGATTTCC GCAGCCTGCT GGCCAAACCC TACTTCGTGC CGAGCGGCAC GCCGGTGTTC CGGCAGCTAC AGTATTTCCA GGAAAACCGG CGGCGCATCG GACTGGTGAT CAACGAATAC GGCGACATGC TGGGGCTGGT GACACTGGAA GACATCATCG AGGAGATGAT CGGCGAGTTC ACCACCACGC TGCCGAACGC CGGCAAGCTG GCCTGGGATG CACAGAACGC CTATCTGGCC GACGCAGGCA TGTCGCTGCG CGACCTGAAC CGCCGCCTGG GCCTGCAACT GCCGACCGAT GGACCGAAAA CGCTCAACGG CCTGGTGCTG GAAGTACTGG AAGAAATTCC CGAGGCTCCG GTCAGCGTAC GGATCGCCGG ATGCGTGATG GACATCGTGC AGATGGACAG CCAGTCGATC CGCACCGTGC GCCTGCACCG GCCCGCCGCG GGGCAAAAGC GCAGTTGA
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Protein sequence | MDSWPLWAQL GAVVLLLCCS AFFSISETSL MALNRHRLRH LAKSNVAGAR RTQGLLGQTD KLLSLILIGN NLINTAVPVL IANLAIHYFG NSGTTLSIAT AIVAFLIIVF CEIAPKIAGA TYPERISFPA SFIIAPLLRL ATPLVTVVNA FVTVLLRLVR INPRQAPEQR MSAEELRTLV LESGNFIPHK HRSILLNLFD LDAITVDDVM TPRARVESLD LSRPIEEVIQ QLETCYHNKL PVFEQDTDQV LGILHVRKAL SLLGHAELIH DDFRSLLAKP YFVPSGTPVF RQLQYFQENR RRIGLVINEY GDMLGLVTLE DIIEEMIGEF TTTLPNAGKL AWDAQNAYLA DAGMSLRDLN RRLGLQLPTD GPKTLNGLVL EVLEEIPEAP VSVRIAGCVM DIVQMDSQSI RTVRLHRPAA GQKRS
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