Gene RSc2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2824 
Symbol 
ID1221672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3036995 
End bp3038272 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content64% 
IMG OID637239226 
Producthypothetical protein 
Protein accessionNP_520945 
Protein GI17547543 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000593821 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0984639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTCCT GGCCGTTATG GGCGCAGCTC GGCGCCGTCG TGCTGCTGCT GTGCTGCTCC 
GCCTTCTTCT CGATCTCCGA GACCAGCCTG ATGGCGCTCA ACCGCCATCG CCTGCGCCAC
CTCGCCAAAT CCAACGTCGC CGGCGCGCGC CGCACGCAGG GCCTGCTGGG CCAGACCGAT
AAGCTGCTGT CGCTGATCCT GATCGGCAAC AACCTGATCA ATACCGCAGT GCCGGTGCTG
ATCGCCAACC TGGCCATCCA TTACTTCGGC AACAGCGGCA CCACGCTGTC GATCGCCACG
GCCATCGTCG CCTTCCTGAT CATCGTGTTC TGCGAGATCG CGCCGAAAAT CGCCGGCGCG
ACGTATCCCG AGCGGATCTC GTTTCCGGCC AGCTTCATCA TCGCGCCACT GCTGAGGCTG
GCGACACCGC TGGTGACCGT CGTCAATGCG TTCGTCACGG TGCTGCTGCG GCTGGTGCGC
ATCAACCCGC GCCAGGCGCC CGAGCAGAGG ATGTCGGCCG AGGAGCTGCG CACGCTGGTG
CTGGAATCGG GCAATTTCAT TCCGCACAAG CACCGCAGCA TCCTGCTCAA CCTGTTCGAC
CTGGACGCCA TCACCGTGGA CGACGTGATG ACGCCGCGCG CGCGGGTGGA ATCGCTGGAC
CTGTCGCGGC CCATCGAAGA GGTGATCCAG CAGTTGGAGA CCTGCTACCA CAACAAGCTC
CCCGTGTTCG AGCAGGACAC CGACCAGGTG CTCGGCATCC TGCACGTGCG CAAAGCCCTG
TCGCTGCTGG GCCATGCGGA GCTCATCCAC GACGATTTCC GCAGCCTGCT GGCCAAACCC
TACTTCGTGC CGAGCGGCAC GCCGGTGTTC CGGCAGCTAC AGTATTTCCA GGAAAACCGG
CGGCGCATCG GACTGGTGAT CAACGAATAC GGCGACATGC TGGGGCTGGT GACACTGGAA
GACATCATCG AGGAGATGAT CGGCGAGTTC ACCACCACGC TGCCGAACGC CGGCAAGCTG
GCCTGGGATG CACAGAACGC CTATCTGGCC GACGCAGGCA TGTCGCTGCG CGACCTGAAC
CGCCGCCTGG GCCTGCAACT GCCGACCGAT GGACCGAAAA CGCTCAACGG CCTGGTGCTG
GAAGTACTGG AAGAAATTCC CGAGGCTCCG GTCAGCGTAC GGATCGCCGG ATGCGTGATG
GACATCGTGC AGATGGACAG CCAGTCGATC CGCACCGTGC GCCTGCACCG GCCCGCCGCG
GGGCAAAAGC GCAGTTGA
 
Protein sequence
MDSWPLWAQL GAVVLLLCCS AFFSISETSL MALNRHRLRH LAKSNVAGAR RTQGLLGQTD 
KLLSLILIGN NLINTAVPVL IANLAIHYFG NSGTTLSIAT AIVAFLIIVF CEIAPKIAGA
TYPERISFPA SFIIAPLLRL ATPLVTVVNA FVTVLLRLVR INPRQAPEQR MSAEELRTLV
LESGNFIPHK HRSILLNLFD LDAITVDDVM TPRARVESLD LSRPIEEVIQ QLETCYHNKL
PVFEQDTDQV LGILHVRKAL SLLGHAELIH DDFRSLLAKP YFVPSGTPVF RQLQYFQENR
RRIGLVINEY GDMLGLVTLE DIIEEMIGEF TTTLPNAGKL AWDAQNAYLA DAGMSLRDLN
RRLGLQLPTD GPKTLNGLVL EVLEEIPEAP VSVRIAGCVM DIVQMDSQSI RTVRLHRPAA
GQKRS