| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2816 |
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| Symbol | proS |
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| ID | 1221663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3029055 |
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| End bp | 3030779 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239217 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | NP_520937 |
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| Protein GI | 17547535 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.196819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGT CCCAGTTCTT CATTTCCACG CTCAAGGAAG CCCCCGCCGA CGCGGAGATC
GTCTCGCACA AGCTGATGAT GCGTGCCGGC ATGATCAAGA AGCTTGGCGC GGGCCTCTAT
ACGTATATGC CCGTGGGTCT GCGCGTGATC CGCAAGGTCG AGCAGATCGT GCGTGAGGAA
ATGAACGCCA GTGGTGCGGT GGAAGTGCTG ATGCCCGTGG TGCAGCCCGC CGAGCTGTGG
CAGGAGACCG GCCGCTGGGA CAAGATGGGC GACGAGATGA TGCGCGTGAA AGATCGCCAC
GAGCGCGATC TTGTCATCCA GCCGACCTCC GAAGAGGTGG TGACCGACAT CGCCCGCACC
GAGATCCGCT CGTACAAGCA GATGCCGGTC AACTTCTACC AGATCCAGAC CAAGTTTCGC
GATGAGCGCC GTCCTCGTTT CGGCATCATG CGCGGCCGCG AGTTCACCAT GAAGGACGCG
TACTCCTTCG ACCGCGACGC CGAGGGTCTG AAGGTCTCGT ACGAGAAGAT GTACGGCGCC
TACACGCGCA TCTTCCAGCG CTTCGGGCTG GAGTTCCGTG CGGTGGCGGC CGACAACGGC
GCCATCGGCG GCTCGGGCTC GCATGAGTTC CACGTGATCG CCGACACCGG CGAGGACGCC
ATCGTCTACA GCCCGGACTC GGACTACGCC GCCAACATCG AGGCTGCCGA GGCGCTGGCC
CCGGCCATGC CGCGCGGCGC TGCCACCGAG GCGCTCACCA AGACGCACAC CCCCAAGCGC
GCCAAGTGCG AGGCCGTGGC CGAGCAGCTG GGCATTGCGC TGCAGCGCAC GGTCAAATCC
ATCGTGCTGG CCAAGGACGT CGAAGGCGGC GAGCCGCAGA TCTGGCTGCT GCTGCTGCGC
GGCGACCACG AACTGAATGA GATCAAGGCC TCGAAGGTGC CGGGCCTGGC CGATTTCCGC
TTTGCCACCG AGGGCGAGAT CCTGCGCGCG TTCGGCACGC CGCCGGGCTA CCTGGGCCCG
ATCGGCACCA AGCAGCCGGT CAAGGTGGTG GCCGACCGCA CCGTCGCCGC CATGAGCGAC
TTCGTCGTCG GCGCCAACGA GGAGGATTTC CACTACACCG GCGTCAACTG GGGCCGCGAC
CTGCCCGAGG CCGAAGTCTA CGACCTGCGC AATGTGGTGG AGGGCGATCC CTCGCCGGAC
GGCAAGGGCA CGCTGGCGAT CTGCCGCGGC ATCGAAGTCG GCCACGTGTT CATGCTGGGC
ACGCGCTACT CTGAATCGAT GAGCGCCACC TTCCTCGACG AGAACGGCAA GACCCAGCCG
ATGATGATGG GCTGCTACGG CATCGGCATC ACGCGGATCC TGGGCGCGGC CATCGAGCAG
AACTACGATG CGCGCGGCAT CATCTGGCCG GTGTCGATCG CGCCGTTTGA GGTGGTGATC
TGCCCGGTGG GCTACGACCG TTCCGAGGCC GTGCGCGCCG AGGCCGACCG CCTGCACGCG
GAACTGGCCG CCGCCGGCAT CGACGTGATC CTGGACGACC GCGGCGAGCG CCCCGGCGCG
ATGTTCGCCG ACTGGGAGCT GATCGGCGTG CCGTTCCGCG TGGTGGTGGG CGAGCGCGGC
CTGAAGGACG GCAAGCTCGA ACTGCAGGGC CGCCGCGACG AGGCCGCCGC CGCCGTGGCG
CCGGCCGACG TGCTGGCCAC CCTCAAGTCG CGCCTGGCGC AATAA
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| Protein sequence | MKASQFFIST LKEAPADAEI VSHKLMMRAG MIKKLGAGLY TYMPVGLRVI RKVEQIVREE
MNASGAVEVL MPVVQPAELW QETGRWDKMG DEMMRVKDRH ERDLVIQPTS EEVVTDIART
EIRSYKQMPV NFYQIQTKFR DERRPRFGIM RGREFTMKDA YSFDRDAEGL KVSYEKMYGA
YTRIFQRFGL EFRAVAADNG AIGGSGSHEF HVIADTGEDA IVYSPDSDYA ANIEAAEALA
PAMPRGAATE ALTKTHTPKR AKCEAVAEQL GIALQRTVKS IVLAKDVEGG EPQIWLLLLR
GDHELNEIKA SKVPGLADFR FATEGEILRA FGTPPGYLGP IGTKQPVKVV ADRTVAAMSD
FVVGANEEDF HYTGVNWGRD LPEAEVYDLR NVVEGDPSPD GKGTLAICRG IEVGHVFMLG
TRYSESMSAT FLDENGKTQP MMMGCYGIGI TRILGAAIEQ NYDARGIIWP VSIAPFEVVI
CPVGYDRSEA VRAEADRLHA ELAAAGIDVI LDDRGERPGA MFADWELIGV PFRVVVGERG
LKDGKLELQG RRDEAAAAVA PADVLATLKS RLAQ
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