Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2810 |
Symbol | |
ID | 1221657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3023524 |
End bp | 3024435 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239211 |
Product | hypothetical protein |
Protein accession | NP_520931 |
Protein GI | 17547529 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.443588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.1588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATTG TACTGTATGC GCTGACAGCG CTTCTCTACG GGGCCCTCGC CTGGTACGCG TGGGCGCGTC GCGGCGGCCT CGAGGCCCAG GCAGCGGGTG CCCTGGTGTC CGGCGGCCAG CCTTTGGCCG GCGCGGCCGT GCTGGTGCCG CCCCCGCCGC CGGCCGCCGA ATCCGGCCCC GCCTGGTGGC GCTGGGCCCT GCTGGGTGCG CTGGCGGTGC ACGGGATGCT GCTGCACGAG ACCATCTTCC CGGCCGCTTC CATGAAGTTC GGCTTCGCCT ATGCGCTGTC GTCCATGCTG TGGCTCGGCG TCGGCATCTA CTGGATCGAG AGCCTGTTCT TCTCGCTGGC GGGCCTGGGC CTGCTGGTGA TGCCGGTCGC GCTGGTCGGC AGCCTGCTGC CGCTGGCGTT CCCGGGCACG CAGATCCTCG GCTATGCCGC CAGCCCGCTG TTCAAGCTGC ACTTCGCCAT CGCGAACGTG GCCTACGGGC TGTTCACGCT GGCGGCCTTC CACGCCATCC TGATGCTGGC CGCCGAGCGC CGCCTGCATA CCATCAACCG GCCGGCGGAA TCCGGCTGGC TCGGGCGCTG GCTGGATCTG CTGCCGCCGC TGCTGACGCT GGAGAAGCTG CTGTTCCGTC TGATCGGCGC GGGGTTCGTG CTGCTCACGC TGACGATCGC CTCGGGCATG CTGTTCTCCG AGCAGTTGTT TGGCCGGGCG TTCCATGTCG ATCACAAGAC CGTCTTCGCC ATCCTGTCGT GGGCGATGTT CGGCGGCATC CTGATCGGCC GCCGTTTCTA CGGCTGGCGC GGGCGCGTGG CGCTGCGCTG GGTGATGGCG GCCTTTGCGA CGCTGATGCT GGCCTATGTC GGCAGCCGCT TCGTGCTGGA AGTCATCTTG CATCGCGCAT AG
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Protein sequence | MVIVLYALTA LLYGALAWYA WARRGGLEAQ AAGALVSGGQ PLAGAAVLVP PPPPAAESGP AWWRWALLGA LAVHGMLLHE TIFPAASMKF GFAYALSSML WLGVGIYWIE SLFFSLAGLG LLVMPVALVG SLLPLAFPGT QILGYAASPL FKLHFAIANV AYGLFTLAAF HAILMLAAER RLHTINRPAE SGWLGRWLDL LPPLLTLEKL LFRLIGAGFV LLTLTIASGM LFSEQLFGRA FHVDHKTVFA ILSWAMFGGI LIGRRFYGWR GRVALRWVMA AFATLMLAYV GSRFVLEVIL HRA
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