| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2806 |
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| Symbol | ampD |
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| ID | 1221653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3018877 |
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| End bp | 3019479 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239207 |
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| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
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| Protein accession | NP_520927 |
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| Protein GI | 17547525 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.601982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGAGG TGGCCGGGCC GGTGCGCATC GGCGCGGACG GCTGGGCGGA CGGGGTGTGC
CGGCATCCTT CGCCCAATGT CGATGCGCGC CCCGAGGGCC TGCCGATCGA CCTGATCGTG
CTGCACAACA TCAGCCTGCC GCCCGCGCGT TTCGGCACCG ACGACGTGCT GGATTTCTTC
GCCAACACGC TCGACTGCGG CGCCCATCCC TACTTCGAGC AGTTGCGCGG CGTGCGGGTT
TCGGCGCACT TCTTCATCCG CCGCACCGGG GCGTGCGTGC AGTTCGCTCC CTGCGACGCG
CGCGCCTGGC ATGCCGGCGT ATCGGATTTC TTCGGCCGCA CGCGCTGCAA CGACTTCTCC
ATCGGCATCG AGATCGAGGG GACGGACGAC CAGCCCTTCA CGCCCGCCCA GTACGCGGCG
ACGGCGGCCC TGGTGCGGGC GATCTGCGCG GCGTACCCGA TCCGGGCAAT CGCCGGGCAT
TCCGACATCG CGCCCGGGCG CAAGACGGAC CCGGGGCCGT GCTTCGACTG GGCACACCTG
CGCCGCCTCG CGAAACTGGA GGCGGCACTG TTCCCGTACC AGGCAGGCGC GGCTCCGGCC
TGA
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| Protein sequence | MPEVAGPVRI GADGWADGVC RHPSPNVDAR PEGLPIDLIV LHNISLPPAR FGTDDVLDFF
ANTLDCGAHP YFEQLRGVRV SAHFFIRRTG ACVQFAPCDA RAWHAGVSDF FGRTRCNDFS
IGIEIEGTDD QPFTPAQYAA TAALVRAICA AYPIRAIAGH SDIAPGRKTD PGPCFDWAHL
RRLAKLEAAL FPYQAGAAPA
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