Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2639 |
Symbol | grpE |
ID | 1221486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2841434 |
End bp | 2842078 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239040 |
Product | heat shock protein GrpE |
Protein accession | NP_520760 |
Protein GI | 17547358 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA CTTCGGAACC CACTTCGCAA CCGGATACGC AAGCCGCCGA GTCGGCGCAA TCCTCCGCCG CAGCAGCCGG CCAGGCCGCC AGCGCCTACT CGAGCCAGGC CCAGCGCGCC AGCGCCGATG CGCAGGCCAT CGCCGGCGAT GAGGCCGCCG TGGCCGAGGC GACGATCGAG CCGGACACCG CCGAACTGCG CCGCCAGCTG GAAGCCGCCG ATGAGAAGGC CCGCCAGAAC TACGAGAACT GGGCGCGCGC CGTCGCGGAG GGCGAGAACA TCCGCCGCCG CGCGCAGGAC GACGTGGCCC GCGCGCACAA GTTCGCCATC GAGGGCTTTG CCGAATACCT GCTGCCCGTG ATGGACAGCC TGCAAGCCGC GCTGGCCGAC GCGTCGGGCG ATGTCGCCAA GCTGCGCGAA GGCGTGGAGC TGACGCTCAA GCAGCTCAAT GCAGCCTTCG AGAAGGGCCG CGTGACCGAG CTGAACCCGG TCGGCGAGAA GTTCGACCCC CATCGCCACC AGGCCATCTC GATGGTGCCG GCCGACCAGG AGGCCAACAC CGTGGTGAAC GTGCTCCAGC GCGGCTATAC GCTGGCCGAC CGCGTGCTGC GCCCGGCGCT GGTGACGGTG GCCGCACCGA AGTAA
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Protein sequence | MKHTSEPTSQ PDTQAAESAQ SSAAAAGQAA SAYSSQAQRA SADAQAIAGD EAAVAEATIE PDTAELRRQL EAADEKARQN YENWARAVAE GENIRRRAQD DVARAHKFAI EGFAEYLLPV MDSLQAALAD ASGDVAKLRE GVELTLKQLN AAFEKGRVTE LNPVGEKFDP HRHQAISMVP ADQEANTVVN VLQRGYTLAD RVLRPALVTV AAPK
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