Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2625 |
Symbol | |
ID | 1221472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2828338 |
End bp | 2829039 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239026 |
Product | DnaA regulatory inactivator Hda |
Protein accession | NP_520746 |
Protein GI | 17547344 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.124613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.134526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCTTC CGCAACAGCT ACCGCTCGAG TTCGGCGCGA CACCCGCCCC GACCATCGGC AACTTCGTCG CCACCGGCAA CGAAGAGGCG GTGCTGCGCC TCTCGGGCCT GGTCGCCGAG CTGGCCGTCG GCCGCGCCGC CGACCGCCTG GTCTACCTGT GGGGCGAATC CGGCAGCGGC CGCAGCCACC TGCTGCACGC TGTCTGCGCG CAGGCGGAGG CCGCCGGCTT CCAGGCGCGC TACCTGGAAG CGAAGGCACC GCTGGAAGCG TTCGAATACG ACCCCGCCAT CACCATCTGG GCCATCGACG ACGCCGAGCG GCTGGACGAA TGGGCACAGG TGGCGGCGTT CAATCTGGTC AACGAAGTGC GCGCGGATCC GCATGCCGCG CTGATCACCG CGGGGGCCGC CGCGCCGATG TCGATGCCGC TGCGTGAAGA CCTGCGCACC CGGCTGGGGT GGGGCCTGGT CTACTGGCTG CGCCCGCTGT CCGACGCCGA CAAGGTCGAA GCGCTGCTCC AGGCCGCCCG CGAACGCGGC ATGCAGCTGT CGGCCGACGT GCCGCAATGG CTTGTGACGC ACTCCTATCG CGACATGCCG AGCCTGATGG CGCTGCTCGA AGCACTCGAC ACCTACTCGC TCGCCCGCAA GCGCGCCGTC ACCCTGCCGC TGCTGCGCGA CATGCTGGCG CTGCTCAAGT GA
|
Protein sequence | MALPQQLPLE FGATPAPTIG NFVATGNEEA VLRLSGLVAE LAVGRAADRL VYLWGESGSG RSHLLHAVCA QAEAAGFQAR YLEAKAPLEA FEYDPAITIW AIDDAERLDE WAQVAAFNLV NEVRADPHAA LITAGAAAPM SMPLREDLRT RLGWGLVYWL RPLSDADKVE ALLQAARERG MQLSADVPQW LVTHSYRDMP SLMALLEALD TYSLARKRAV TLPLLRDMLA LLK
|
| |