| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2565 |
|---|
| Symbol | |
|---|
| ID | 1221412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2774949 |
|---|
| End bp | 2775482 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637238966 |
|---|
| Product | putative acetyltransferase protein |
|---|
| Protein accession | NP_520686 |
|---|
| Protein GI | 17547284 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA CGCAAGCCGA TCGCGCCACC TTCACCCTGC GCAGCGCCGC GCCGGACGAC
TGCGAGGCGC TGGTCCGCCT GATCGGGGCG CTCGCCGAGT ACGAAAAACT GACGCACCTG
ATGCAGGCCA CCCCGGAAGC CCTGCGCGCC GTGCTGTTCG GCCCGCGTCC GTACGGCGAG
GCGGTGGTGG CCGAGGTGGA CGGCCGAGCC GTCGGCTTCG CGCTGTTCTT CCACAATGTC
TCGACCTTCC TGTGCAAGCC GGGCCTGTAC CTGGAAGACC TGTTCGTGGA GCCGGCCTGG
CGCGGTCACG GCATCGGCAA GGCGCTGCTG GTGCACGTGG CGCGCCTCGC GCGGGAGCGG
GACTGCGGCC GCTTCGAATG GAGCGTGCTG GACTGGAACG CACCGTCCAT CGCCTTCTAC
GAAGCGATGG GCGCCGACGT GCTGCCCGAC TGGCGCATCT GCCGCACCAC CGGCGACGCG
CTCGCCAGGA TGGCCGCGCT ACCGATGCCC GAGGGCCTGA CCGCGCCGGA CTGA
|
|---|
| Protein sequence | MTTTQADRAT FTLRSAAPDD CEALVRLIGA LAEYEKLTHL MQATPEALRA VLFGPRPYGE
AVVAEVDGRA VGFALFFHNV STFLCKPGLY LEDLFVEPAW RGHGIGKALL VHVARLARER
DCGRFEWSVL DWNAPSIAFY EAMGADVLPD WRICRTTGDA LARMAALPMP EGLTAPD
|
|---|
| |