| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2559 |
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| Symbol | dedA |
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| ID | 1221406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2767764 |
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| End bp | 2768420 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238960 |
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| Product | DEDA DSG-1 protein transmembrane |
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| Protein accession | NP_520680 |
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| Protein GI | 17547278 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0105855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGATATCG TGATGCAACT GATCGACATC GTGCTGCATG TCGACAAATC GCTGGGGATG
CTGATCCAGC AATACGGCGC GTGGGTCTAC GTGCTGCTGT TCGCCATCGT GTTTGCCGAA
ACCGGCCTGG TGGTGCTGCC GTTCCTGCCG GGCGACACGC TATTGTTCAT TGCCGGCGCC
ATGTGCGCAA CCGGCCAGAT GGATGCCTGG CTGCTGATCG CCCTGCTGGT GACGGCCGCG
GTCACGGGCA ATACGGTCAA CTATTTCGTC GGCACCTGGA TCGGGCCGAA GGTGTTCGAC
GGGCATATCC GCTTTCTCGA CCACGAGGCG TTGCTCAAGA CGCACGCCTT CTACGAGCGC
CACGGCGGCA AGACACTGGT GATGGCGCGC TTCATTCCGG TGGTGCGCAC GTTCGCGCCG
TTCGTGGCCG GCGTGTCGAA GATGACCTTC GCCAAGTTCC AGCTGTTCAA CATGATCGGG
GCGGTGCTGT GGGTGGCGAT CCTGGTGCTG TCCGGCGAAG CCTTCGGCAC CGTGCCGGTG
ATTCGCGACC ACCTGAACAC CATCGTGCTG ATCGGCCTGG GCGCGGCCGT CGTGCCGCTG
GTGCTGGGCG GGCTGTGGAA GCTGCTCAAG CGCCGCCGCA CGGTGGTGCA GAAATAA
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| Protein sequence | MDIVMQLIDI VLHVDKSLGM LIQQYGAWVY VLLFAIVFAE TGLVVLPFLP GDTLLFIAGA
MCATGQMDAW LLIALLVTAA VTGNTVNYFV GTWIGPKVFD GHIRFLDHEA LLKTHAFYER
HGGKTLVMAR FIPVVRTFAP FVAGVSKMTF AKFQLFNMIG AVLWVAILVL SGEAFGTVPV
IRDHLNTIVL IGLGAAVVPL VLGGLWKLLK RRRTVVQK
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