Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2538 |
Symbol | |
ID | 1221385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2746191 |
End bp | 2747267 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238939 |
Product | lipoprotein transmembrane |
Protein accession | NP_520659 |
Protein GI | 17547257 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.405057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTGCA ATAGCGGCCA TCCCTTGATC CGATCGGCGC CGTGGCGGCG CAAGCACATG AAGATCCCCT TCCTTTCCCG CATCGACGGC TTCATCCGCG CCATGCTGGT GATGGTCCTG CTGGCCCTGC TGTTCCCGTC GCTGGGCGCG AGCGCGGGGC CGCTGCACCT CGATATCGTC ACCGTGCTGG GGGTGTCGCT GGTGTTCTTC CTGCACGGCG CGGCGCTGTC GCGCGAGAAG ATCGTCGAAG GCGCGCGCAA CTGGCGCCTG CACCTGTTCG TGCAGAGCTG CACGTTCGTC CTGTTCCCGC TGATCGGCGC GGCGATCCTG GTCGCATGCA AGCCCTTCAT CCCGGCCGAG CTGCTGCTGG GCGTGTTCTA CCTGTGCGCG CTGCCGTCCA CGGTGTCGTC GTCGGTGGCG ATGACCGCGA TGGCCAAGGG AAACGTGCCG GCCGCCATCT TCAATGCCAC CATCTCGGGC CTGATCGGCA TGGTGGCCAC GCCGCTGCTG ATGAGCTTCG TGATCCAGGC CTCCGGCGCG GAGCTGCCGG TCGGCAAGGC ACTGCTGGGC GTGGCCGAGC AGTTGCTGCT GCCCTTCGTG CTGGGCCAGC TGCTGCGCCC GGCCATCGGC GGCTTCATCA CGCGGTATAA GGCGATCATC AACAAGGTCG ATCGCGCGGT GATCCTGCTG ATCGTCTTCA ACTCGTTCGC CGATTCGACA CATGCGGGCG TGTGGTCGAA GTATCCGTGG GAGACCATCG TCGCCGTGGC GATCATGAGC GGCGCGCTGC TGTTCGTGGT GCTGGGCGCG ACGACGTGGA TCGCGCGGCG CTTCGGCTTC GGCCTGGCCG ATGAGATCAC CGCCGTGTTC TGCGGCTCGA AGAAGAGCCT GGCCAACGGC GTGCCGATGG CGAAGATCCT GTTTGCCGGC AACCCGGCGC TGGGCCTGAT CGTGCTGCCG ATCATGATCT ATCACCAGCT GCAACTGATC GTCTGCTCGA CGCTGGCGCG CCGGTACGCG GATCGCATCG CGCACGCGGA AGACCGGGCC GCCGACCGCG CCGGCCAGCC CGCCTGA
|
Protein sequence | MACNSGHPLI RSAPWRRKHM KIPFLSRIDG FIRAMLVMVL LALLFPSLGA SAGPLHLDIV TVLGVSLVFF LHGAALSREK IVEGARNWRL HLFVQSCTFV LFPLIGAAIL VACKPFIPAE LLLGVFYLCA LPSTVSSSVA MTAMAKGNVP AAIFNATISG LIGMVATPLL MSFVIQASGA ELPVGKALLG VAEQLLLPFV LGQLLRPAIG GFITRYKAII NKVDRAVILL IVFNSFADST HAGVWSKYPW ETIVAVAIMS GALLFVVLGA TTWIARRFGF GLADEITAVF CGSKKSLANG VPMAKILFAG NPALGLIVLP IMIYHQLQLI VCSTLARRYA DRIAHAEDRA ADRAGQPA
|
| |