Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2524 |
Symbol | |
ID | 1221371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2730414 |
End bp | 2731139 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238925 |
Product | hypothetical protein |
Protein accession | NP_520645 |
Protein GI | 17547243 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0445127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00571488 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAAGC TGCTGATCCT GCTGCTCTCG GGACTGAAGT TCGGCAAGCT GCTGACCACC GGCGGCACCA TGCTGCTGTC GGTGATGGCG TACGCCTTCG TGTTCGGCTG GCGCTATGCG GCGGGCTTCG TGGTGCTGCT GTTCATCCAC GAGATGGGCC ACTACGTGGC GGCGCGCCAG CGCGGGCTGG CCGTGGGCGC GCCCACCTTC ATCCCATTCG TCGGCGCGTG GATCGACCTG AAGGAACAGC CGATGGACGT CGAGACCGAG GCGTACATCG GCCTGGCCGG CCCGGTCGCG GGCACGGTGG GCGCCATGCT GTGCTACGGC CTGGCGCGCT GGACCGACAG CCAGCTGCTG CTTGCGCTGG CGTATGCCGG GTGCTTCCTG AACCTGTTCA ACCTGATCCC GCTGGCGCCG TTCGACGGCG GGCGCATCAC CGCGGTGTTG TCGCCGCGCA TCTGGTTCCT GGGCGTGCCG GTGCTGGTGG CGCTGTTCGT CTGGCGCATG AGCCCGATCC TGGTGCTGAT GGCGATCCTG GCCGTGCCCC AGCTGATGAA GGCATGGCGC TACGATCCCG ACGCGCCGGA AAATCGCGCC TACTACAGCA TCTCCGCCGA AGCGCGGCTG ACCTTCACGG TGTACTACCT GGGCCTGGTC GTGTTCCTCG CGATGATGAC CCATGAACTG CACGGCATGC TGGAGACGAT CCGACCGGCC GGGTGA
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Protein sequence | MAKLLILLLS GLKFGKLLTT GGTMLLSVMA YAFVFGWRYA AGFVVLLFIH EMGHYVAARQ RGLAVGAPTF IPFVGAWIDL KEQPMDVETE AYIGLAGPVA GTVGAMLCYG LARWTDSQLL LALAYAGCFL NLFNLIPLAP FDGGRITAVL SPRIWFLGVP VLVALFVWRM SPILVLMAIL AVPQLMKAWR YDPDAPENRA YYSISAEARL TFTVYYLGLV VFLAMMTHEL HGMLETIRPA G
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