Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2466 |
Symbol | cspD |
ID | 1221313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2675412 |
End bp | 2675615 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637238867 |
Product | cold shock-like transcription regulator protein |
Protein accession | NP_520587 |
Protein GI | 17547185 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.4868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACG GTACGGTCAA GTGGTTCAAC GACGCCAAGG GTTTTGGCTT CATCTCTCCC GACGAGGGCG GCGAAGAGCT GTTCGCGCAT TTCTCGGCGA TCCAGATGAA CGGTTTCAAG ACGCTCAAGG AAGGCCAGCG CGTCGCGTTC GACGTGACAC AGGGCCCGAA GGGCAAGCAG GCCACCAACA TCCAGGCCGC CTGA
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Protein sequence | MANGTVKWFN DAKGFGFISP DEGGEELFAH FSAIQMNGFK TLKEGQRVAF DVTQGPKGKQ ATNIQAA
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