Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2455 |
Symbol | vsrC |
ID | 1221302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2661423 |
End bp | 2662088 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238856 |
Product | response regulator VSRC transcription regulator protein |
Protein accession | NP_520576 |
Protein GI | 17547174 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCT CGCTGCGTAG CCTGCTGGTG GTCGATGACC ACCCTCTCGC CTTATCTGGC ACGACCACTT TTCTTGCGCA AGCCCTGCCT GAAATCCAAG TCCATGCGGC CATCGGCCGG CGTCAGGCCC TGGCGCTGAT CGACGAGGGC ATCCGCCCGG ACGTGGTCCT GCTGGATGTC TGGCTGTCCG ACTGCACGGG TTTCGACGCG ATGCGCGAAC TGCGCGGCAA GCTGCCCGAG GCGCGCTTCG CCTTCATGTC GGCCGAGAAC ACGCCGGAAA TCGTCGCGAA AGCACAGGCG CTGGGCGCCA TCGGGTTCAT CGGCAAGCAC GCCGACGCAC ACGCGTTCTC GCAGGCGGTG GCGGGCATTT TCGGCGGGGA CTCGTCGTTC CCGTCGGAAG ACGACCTGGG CATGGCCAAC GGCAAGAACG GCGCCTCCCA CGGCATCCCC ATCACGCCGG CCGAACTGGG CCTGACGCCG CGCCAGGGTT CGGTGCTGGC ACTGCTGCTC GAAGGGTTGC CGAACAAATC CATCGCGCGC CAACTGGGCC TGACGGAGAA CACCGTCAAG GAACACGTCT CGGCGATCCT GCAGCGGCTG GGCGTGCGCA CGCGCATCCA GATCATCTCG CGCATGGAGC GCTTCCGCCT GACCGGCTCG GCCTGA
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Protein sequence | MTSSLRSLLV VDDHPLALSG TTTFLAQALP EIQVHAAIGR RQALALIDEG IRPDVVLLDV WLSDCTGFDA MRELRGKLPE ARFAFMSAEN TPEIVAKAQA LGAIGFIGKH ADAHAFSQAV AGIFGGDSSF PSEDDLGMAN GKNGASHGIP ITPAELGLTP RQGSVLALLL EGLPNKSIAR QLGLTENTVK EHVSAILQRL GVRTRIQIIS RMERFRLTGS A
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