Gene RSc2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2449 
SymbolnadA 
ID1221296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2654180 
End bp2655328 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID637238850 
Productquinolinate synthetase 
Protein accessionNP_520570 
Protein GI17547168 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC ACATCAAGAC GGTTGAATTC GAGCGCCCGA ATATGCTCGC CGAGGCGCAA 
TCCGGGGCCA GTTGCGTCGC GCACGCCTGG GCCAAGGTGC CGCCGGCTTT GTCACGCGAG
GAGCGCGACG CCCTGAAAGC CCGCATCAAG CGTCTGCTCA AGGAGCGGAA TGCAGTGCTG
GTCGCGCACT ACTACGTCGA TGCCGACCTG CAGGACCTGG CCGAGGAGAC CGGGGGGTGC
GTGTCGGATT CGCTGGAGAT GGCCCGCTTC GGCCGTGACC ACTCGGCCAA GACACTGGTG
GTGGCAGGCG TGCGCTTCAT GGGTGAGACC GCCAAGATCC TGAGTCCTGA AAAGACCGTG
CTGATGCCGG ATCTGGATGC GACCTGCTCG CTGGACCTGG GTTGTCCGCC GGACACGTTC
GCTGCCTTCT GTGACGCGCA TCCGGACCGC ACTGTCGTCG TCTATGCCAA CACCAGCGCC
GCCGTGAAGG CGCGCGCCGA CTGGATGGTC ACGTCCTCCA TCGGCCTGAA GATCGTGCAG
CATCTGCACG AGCAGGGACA GAAGATCCTG TGGGCGCCGG ATCGCCACCT GGGTAGCTAC
ATCCAGCAGC AGACCGGCGC CGATATGCTG CTGTGGCAGG GTTCGTGCCT GGTCCACGAC
GAGTTCAAGG GCGTGGAGCT GGACCTGCTG CGAGCCGAGC ATCCGCACGC CAAGGTGTTG
GTGCATCCGG AGTCGCCGCC ATCGGTGGTA GCGCAGGCGG ACGTGGTGGG CTCGACCTCG
CAGCTGATCG CTGCGGCACA GTCGCTGCCG GCGGACGCGT TCATCGTCGC GACCGACAAC
GGCATCCTGC ACAAGATGCG CATGGCCGCG CCCGGCAAGC GTTTCATCGA GGCGCCGACC
GCCGGCAACA GCGCCACGTG CAAGAGCTGC GCGCACTGCC CGTGGATGGC GATGAACGCC
TTGACCAACC TGGCCGAGGT GCTCGAGACC GGCCGCAACG AAATCCACGT CGATCCGCAG
ATCGGCCAGC AGGCGGTGCG CTGCATTACG CGCATGCTGG ACTTCGCCGC GCGCGAGAAA
ACGACAGTCC GGCCCCAGGG CGATCTGGCG GCCAATACGC AACTCTTCCA AGGAGTCGGT
CCGGCATGA
 
Protein sequence
METHIKTVEF ERPNMLAEAQ SGASCVAHAW AKVPPALSRE ERDALKARIK RLLKERNAVL 
VAHYYVDADL QDLAEETGGC VSDSLEMARF GRDHSAKTLV VAGVRFMGET AKILSPEKTV
LMPDLDATCS LDLGCPPDTF AAFCDAHPDR TVVVYANTSA AVKARADWMV TSSIGLKIVQ
HLHEQGQKIL WAPDRHLGSY IQQQTGADML LWQGSCLVHD EFKGVELDLL RAEHPHAKVL
VHPESPPSVV AQADVVGSTS QLIAAAQSLP ADAFIVATDN GILHKMRMAA PGKRFIEAPT
AGNSATCKSC AHCPWMAMNA LTNLAEVLET GRNEIHVDPQ IGQQAVRCIT RMLDFAAREK
TTVRPQGDLA ANTQLFQGVG PA