Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2439 |
Symbol | |
ID | 1221286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2644714 |
End bp | 2645850 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637238840 |
Product | amino-acid transmembrane ABC transporter protein |
Protein accession | NP_520560 |
Protein GI | 17547158 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.703384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAA CTGCAACGGA ATTCAAAGCG CCGAAGAAGA CGCGCGCCGC GCTTCTCGGC TTCTTCGTCC TCGCCATCTT CGCCCCGTTC CTCGTGGGCG CCGTCGGCGG GAACTACTGG GTACGCGTGC TGGACTTCGC ACTGCTGTAC ATCATGCTGG CCCTGGGCCT GAACATCGTG GTGGGTTTTG CCGGCCTGCT CGACCTGGGC TACATCGCGT TCTACGCGGT GGGCGCCTAC ATGATGGCGC TGCTGGGCTC GCCGCACCTG ACCAACCAGT TCGAGTGGAT CCATCAGCTG TTCCCGAACG GGCTGCATCT GCTGATCTGG TGGGTGATCC CGCTGGGCGC GGGGCTGGCG GCGCTGTTCG GCATCCTGCT GGGGGCGCCG ACGCTCAAGC TGCGCGGCGA CTACCTCGCC ATCGTGACGC TGGGCTTCGG CGAGATCATC CGCATCTTCA TGAACAACCT CGACCGCCCG GTGAACATCA CCAACGGTCC GAAGGGCGTC AACCTGATCG AGCCGGTCAA GCTCTTCGGG TTCGACTTCT CGAAGCGGCA TGACATCTTC GGCATCCACT TCGAGCCGGT GCACATGTAC TACTACCTGT TCGTGCTGCT GGCGATGGGC ATCATCACGG TGTGCCTGCG CCTGCAGAAT TCGCGGATCG GTCGTGCATG GGTTGCCATC CGCGAGGACG AGATCGCCGC CAAGGCCATG GGCATCAACA CCCGCAACAT CAAGCTGCTG GCGTTCGCCA TGGGTGCGTC GTTCGGCGGC GTGTCGGGGG CGATGTTCGC GTCGTTCCAG GGCTTCGTGT CGCCGGAATC GTTCGTGCTG TGGGAGTCGA TCTACATCCT GGCCATCGTG GTGCTGGGCG GCATGGGCCA TATCCCGGGC GTGATCCTGG GCGGCATCCT GCTGGTGGGC TTCCAGGAAC TGCTGCGCGC GCTGGCCGAG CCGATCCAGA ACAAGCTGTT CGGCCACGTG ATCGTGGAAG CGGAAGTGCT GCGTCAGCTG CTGTTCGGCC TGGCGATGGT GGGGGTGATG CTGTATCGCC CCGCGGGCCT GTGGCCCTCG CCGCGCAAGG AAGACCGCCC GCAGAAGGCG CGGGTCGGTG GTTTGTCCCG CATCTGA
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Protein sequence | MTETATEFKA PKKTRAALLG FFVLAIFAPF LVGAVGGNYW VRVLDFALLY IMLALGLNIV VGFAGLLDLG YIAFYAVGAY MMALLGSPHL TNQFEWIHQL FPNGLHLLIW WVIPLGAGLA ALFGILLGAP TLKLRGDYLA IVTLGFGEII RIFMNNLDRP VNITNGPKGV NLIEPVKLFG FDFSKRHDIF GIHFEPVHMY YYLFVLLAMG IITVCLRLQN SRIGRAWVAI REDEIAAKAM GINTRNIKLL AFAMGASFGG VSGAMFASFQ GFVSPESFVL WESIYILAIV VLGGMGHIPG VILGGILLVG FQELLRALAE PIQNKLFGHV IVEAEVLRQL LFGLAMVGVM LYRPAGLWPS PRKEDRPQKA RVGGLSRI
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