| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2392 |
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| Symbol | cobD |
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| ID | 1221238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2599557 |
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| End bp | 2600552 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637238792 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | NP_520513 |
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| Protein GI | 17547111 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0151839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGT GGACGGGCAG TGTCTTCGAT CTGGGCCCGA TGGCGATCGC CGCCGCCGCG
CTGGCCGGCG TGGGGCTGGA CCGCCTGCTG GGCGAGGCGC CGCGCTGGCA TCCGCTGGTC
GGCTTCGGCC GGGTGGCCGC ATGGATCGAG CGCGGGCTCA ATCGCCGGCC CGCCGCGCGC
GTGCTGTCCC GCGCGGCCGG CATGGTGGCG TGGTGCCTTG CCGTATTGCC CGGCGTAGCC
ATCGCCGCGT GGATCACCGC GCTGGCGCCG GACACGGCCC GGCTGGGCGC CTGGATCGCC
GACGTCGTCG CGCTGTACTT CGCCGTCGGT GCCCGCAGCC TGCGCGACCA CATCGCGCCC
ATCGCCGAAG CGCTGCAGGC GGGCGACCTG CCCCGCGCGC GCGGCCTGGC CTCGCGCATC
GTCTCGCGCG ATCTGCATGA CGCGGACGAG GAGGCCATCG CCCGCGCCGC GGTGGAGTCG
GCGCTGGAGA ACGGCAGCGA CGCCATCTTC GCGCCGCTGT TCTGGCTCGT CGTCGGCGGC
GCGCCCGGCG TGGTGCTGTA TCGCCTGGCC AATACCCTCG ATGCCATGTG GGGCTATCGC
AATGCCCGCT TCGGCCGCTT CGGCTGGGCG GCCGCGCGCA TCGACGACGT GCTGAACTGG
ATGCCCGCGC GCCTGACCGC CGCAAGCTAT GCACTGCTCG GCCACACCGC GGACGCGCTG
CGCTGCTGGC GTGCACAGGC GCCCCGGTGG TCGAGCCCGA ACGCCGGACC GGTGATGGCC
TCGGGCGCCG GCAGCCTGCG CGTGCAGCTG GGCGGCATGG CACGCTACGA CGGCATCGAC
GAAACCCGCC CGCCGCTCGG CATCGGCCGC CCCGCCCGCG CCGCGGATAT CCGGCGCGCG
CTGGCGCTGG TCTCGCGCAC GCTCGGTCTC TGGCTGGCGG TCCTGGCGGC GGGCGGCGCG
CTGGCCTTCG CCGGCCTCGC GCGGCAGGGC CTATGA
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| Protein sequence | MTAWTGSVFD LGPMAIAAAA LAGVGLDRLL GEAPRWHPLV GFGRVAAWIE RGLNRRPAAR
VLSRAAGMVA WCLAVLPGVA IAAWITALAP DTARLGAWIA DVVALYFAVG ARSLRDHIAP
IAEALQAGDL PRARGLASRI VSRDLHDADE EAIARAAVES ALENGSDAIF APLFWLVVGG
APGVVLYRLA NTLDAMWGYR NARFGRFGWA AARIDDVLNW MPARLTAASY ALLGHTADAL
RCWRAQAPRW SSPNAGPVMA SGAGSLRVQL GGMARYDGID ETRPPLGIGR PARAADIRRA
LALVSRTLGL WLAVLAAGGA LAFAGLARQG L
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