Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2386 |
Symbol | |
ID | 1221232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2594104 |
End bp | 2594985 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637238786 |
Product | hypothetical protein |
Protein accession | NP_520507 |
Protein GI | 17547105 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000700551 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGACTC CCGCGCAGGA CAAGCTGCCG CTTTCCGTCG AGCTGCCCAG CGTGGCGCCC GAACAGGATT CCACGCCCGC CCAGATCGAC GGTCTGGCCT TCGCGCGGCT GTACGGCGAG CCGCTGTTCA AGCTGCCGCA GGACCTCTAC ATCCCGCCCG ATGCGCTGGA GATCTTTCTC GAAGCCTTCG AAGGACCGCT GGACCTGCTG CTGTACCTGA TCCGCCGCCA GAACTTCAAT GTGCTGGACA TCCCGATGGC GCAGGTGACG CGGCAATACC TGGCGTACAT CGAGCAGATC CGCGCGACCA ACCTCGAGCT CGCCGCCGAA TACCTGCTGA TGGCGGCCAT GCTGATCGAG ATCAAGTCGC GCATGCTGCT GCCGGTCAAG AAGACCGACT CCGGCGAAGA ACCCGAAGAC CCGCGCGCCG AACTGGTGCG CCGCCTGCTC GAATACGAGC AGATGAAGCT CGCCGCGCAG AAGCTCGACA CCGTGCCGGT GCTCGGGCGC GACTTCCTGC GCGCGCAGGT CTACATCGAA CAGAGCCTCG CGCCGCGCTA CCCCGACGTC AACGCCGATG ACCTGCGTGC GGCGTGGGCC GACGTGCTGC GCCGGGCCAA GCTCACCCAG CACCACAAGA TCTCGCGCGA AGAGCTTTCC GTGCGCGAGC ACATGAGCCA GATCCTGCGC CGACTGCAGC ACGCGCGGTT CATGGAATTC ACCGAGCTGT TCGACGACGT CATCCGCTCC GGCAAGGGTG CGCCCATCGT GGTGGTCAAC TTTGTCGCCA TGCTGGAGCT ATCGCGCGAA TCGCTGCTGG AAATCACCCA GGCCGAACCC TACGCGCCGA TCTACGTGCG GCTGGCCTAT TCCCCGACCT GA
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Protein sequence | MTTPAQDKLP LSVELPSVAP EQDSTPAQID GLAFARLYGE PLFKLPQDLY IPPDALEIFL EAFEGPLDLL LYLIRRQNFN VLDIPMAQVT RQYLAYIEQI RATNLELAAE YLLMAAMLIE IKSRMLLPVK KTDSGEEPED PRAELVRRLL EYEQMKLAAQ KLDTVPVLGR DFLRAQVYIE QSLAPRYPDV NADDLRAAWA DVLRRAKLTQ HHKISREELS VREHMSQILR RLQHARFMEF TELFDDVIRS GKGAPIVVVN FVAMLELSRE SLLEITQAEP YAPIYVRLAY SPT
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