Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2363 |
Symbol | argH |
ID | 1221209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2566073 |
End bp | 2567488 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238763 |
Product | argininosuccinate lyase |
Protein accession | NP_520484 |
Protein GI | 17547082 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.196819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC AACTCGCCAA GAAGGCCGAA GCGTGGTCCG CCCGCTTTAA CGAGCCGATG TCCGACCTCG TCAAGCGCTA TACCGCCTCG GTGTTCTTCG ACAAGCGCCT CGCGCTGTTC GACATCCAGG GCTCGCTCGC GCACGCGGCC ATGCTCGCCA AGCAGGGCAT CATCGCGGAG GCCGATCGCG CTGCCATCGA GCAAGGCATG GCGCAGATCC GCCAGGAGAT CGAAGCCGGC ACGTTCGAGT GGAAGCTGGA CCTGGAAGAC GTGCACCTGA ACATCGAAGC GCGCCTGACC GCCATGGCGG GCGACGCCGG CAAGCGCCTG CACACCGGCC GCTCGCGCAA CGACCAGGTC GCCACCGACA TCCGCCTGTG GCTGCGCAGC GAGATCGACA ATATCGTCGG CTTGCTCCGC GCCCTGCGCG GCGCCCTGCT GGACCTGGCC GAGCAGCACA CCAACACCAT CGTCCCCGGC TTCACGCACC TGCAGGTCGC GCAACCGGTG GTGTTCGGCC ACCACCTGCT GGCCTATGTC GAGATGTTCA CGCGCGACAC CGAGCGCATG CTCGACGCCC GCAAGCGGGT CAACCGCCTG CCGCTGGGCG CCGCCGCGCT GGCCGGCACG AGCTACCCGA TCGACCGCGA ATTCGTCGCG CAGCAGCTGG GCTTCGACGG CGTGTGCCGC AACTCGCTGG ATGCGGTGTC GGACCGCGAC TTCGCCATCG AATTCTGCGC CGCCGCCGCG CTGGTGATGA CGCACATCTC GCGCTTCTCG GAAGAGCTGG TGCTGTGGAT GAGCCCGCGC GTGGGCTTCA TCGACATCGC CGACCGCTTC TGCACCGGCA GCTCGATCAT GCCGCAGAAG AAGAACCCCG ACGTGCCCGA ACTGGCGCGC GGCAAGACCG GCCGCGTCAA CGGCCACCTG ATCGGCCTGC TCACGCTGAT GAAGGGCCAG CCGCTGGCCT ACAACAAGGA CAACCAGGAA GACAAGGAAC CGCTGTTCGA CACGGTCGAC ACGGTGGTCG ACACGCTGCG CATCTTCGCC GACATGGTGC CCGGCATCAC GGTCAAGGCC GACGCCATGC GCGCCGCCGC CCTGCAGGGC TACGCCACCG CCACCGACCT GGCCGACTAC CTGGTCAAGC GCGGCCTGCC CTTCCGCGAC GCGCACGAAG CCGTGGCCCA CGCCGTGCGC GCCTGCGACG ACCTGCGCTG CGACCTGGCC GACCTGTCGG TGACGCAGCT GCGCGAGATC AGCGGCCTGG GTGACAAGGC GAACCTGATC GGCGACGACG TGCACGCCGT GCTGACGCTG GAAGGCTCGG TTGCTTCGCG CAACCATATC GGCGGGACGG CGCCGGAGCA GGTGAGGCTG GCGATTGTTG CGGCGCGGGC TGGGCTGGCG GGCTAA
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Protein sequence | MTSQLAKKAE AWSARFNEPM SDLVKRYTAS VFFDKRLALF DIQGSLAHAA MLAKQGIIAE ADRAAIEQGM AQIRQEIEAG TFEWKLDLED VHLNIEARLT AMAGDAGKRL HTGRSRNDQV ATDIRLWLRS EIDNIVGLLR ALRGALLDLA EQHTNTIVPG FTHLQVAQPV VFGHHLLAYV EMFTRDTERM LDARKRVNRL PLGAAALAGT SYPIDREFVA QQLGFDGVCR NSLDAVSDRD FAIEFCAAAA LVMTHISRFS EELVLWMSPR VGFIDIADRF CTGSSIMPQK KNPDVPELAR GKTGRVNGHL IGLLTLMKGQ PLAYNKDNQE DKEPLFDTVD TVVDTLRIFA DMVPGITVKA DAMRAAALQG YATATDLADY LVKRGLPFRD AHEAVAHAVR ACDDLRCDLA DLSVTQLREI SGLGDKANLI GDDVHAVLTL EGSVASRNHI GGTAPEQVRL AIVAARAGLA G
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