Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2357 |
Symbol | hemC |
ID | 1221203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2556982 |
End bp | 2557986 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238757 |
Product | porphobilinogen deaminase |
Protein accession | NP_520478 |
Protein GI | 17547076 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.206721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.217288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAA ACGCCCGTCC GACCTCCGTC GAATCCCCTC TGGCAGCCCA GGCGCCGACC AAGCTGGTCA TCGCCTCGCG CGAAAGCCGG CTCGCCATGT GGCAGGCCGA ATACGTGCGT GCTGCGTTGC AAAAATACTA TCCCGCGTGC GACGTGTCCA TCCTGGGCAT GACTACGCGC GGTGACCAGA TTCTCGACCG CTCGCTCGCC AAGGTGGGCG GCAAGGGCCT GTTCGTGAAG GAGCTCGAGG TCGCGCTCGC CGAGGGCCGC GCCGACCTCG CCGTCCACTC GCTCAAGGAC GTGCCGATGG AGCTGCCGCC GGGCTTCGTG CTGTCGGCCA TCCTCGAGCG CGAGGATCCG CGTGATGCCT TTGTCTCCAA TGATTACGCC GATCTCGCCG CGCTGCCCGC GGGCGCGGTG GTGGGCACCT CCAGCCTGCG CCGCGAGGCG TCGCTGCGGG CGCGCTTTCC GCACCTGGTC ATCCAGCCGC TGCGCGGCAA TCTCGACACA CGGCTGTCCA AGCTCGACCG CGGCGATTAC GCGGCCATCA TCCTCGCGGC CGCCGGGCTC AAGCGGCTGG GGCTGTCCGA GCGCATCCGC GCCGTCATCG CGCCCGAAAC GTCCCTGCCG GCGGCGGGGC AGGGCGCGCT CGGCATCGAG AGCCGCGTCG ATCGCCACGA CGTGCAGGCC TGGCTCGCGC CGCTGCATCA CGCGCCCACG GCGCTGGCCG TGACCGCCGA GCGCGCGGTG TCGCGCCAGC TGGGCGGCTC GTGCCAGGTG CCGCTGGCCG CGTTCGCGCA ATGGACCGAT GCCGGCGCGC TGCGCCTGCG CGCCTTCGTC GCTTCGCCGG ACGGCCGCCG CAAGCTTGCC GCCGAAGCCG AGGCCACGCC CGCCACACCG GCCGAGGCCG AGGCCCTGGG CGCCCGCGTC GCGCAGCAGA TGCTGGACGG CGGCGCACAC GACATCCTCG CCACGCTGGG CGCCGACGCG CCGCCCGCCA CCTGA
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Protein sequence | MSSNARPTSV ESPLAAQAPT KLVIASRESR LAMWQAEYVR AALQKYYPAC DVSILGMTTR GDQILDRSLA KVGGKGLFVK ELEVALAEGR ADLAVHSLKD VPMELPPGFV LSAILEREDP RDAFVSNDYA DLAALPAGAV VGTSSLRREA SLRARFPHLV IQPLRGNLDT RLSKLDRGDY AAIILAAAGL KRLGLSERIR AVIAPETSLP AAGQGALGIE SRVDRHDVQA WLAPLHHAPT ALAVTAERAV SRQLGGSCQV PLAAFAQWTD AGALRLRAFV ASPDGRRKLA AEAEATPATP AEAEALGARV AQQMLDGGAH DILATLGADA PPAT
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