| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2323 |
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| Symbol | |
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| ID | 1221168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2522137 |
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| End bp | 2523702 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238722 |
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| Product | transporter transmembrane protein |
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| Protein accession | NP_520444 |
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| Protein GI | 17547042 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.13437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC ATGACATCGA GCAGCCAACC CGGCCGCAGA CAGACCATCC CTTTGCCGCG
CGCAACACCG TGGCGCTACT GGCCGTATGC TTGGCCGCCC TGATGTTCGG GTTGGAGATT
TCCAGCGTGC CGGTGATTCT CCCCACGCTG GAAGTGGCGC TGCATGGCGA TTTCAGCGGC
ATCCAGTGGA TCATGAATGC CTACACCATC GCCTGCACTG CGGTATTGAT GGCGACGGGA
ACGCTGGCGG ACCGCTATGG CCGCAAACGC GTATTCCTCT ACACGATCGC ATTGTTTGGC
GTCGCCTCGC TGCTGTGCGG CCTGGCGTGG AATACGCCCA TCCTGATCGC CAGCCGCTTC
TTGCAGGGCG CGAGCGGTGG CGCGATGCTC ATTTGCCTCG TGGCAGTGCT CTCGCACCAG
TTCCCCGAAG GCGCCGAACG CGGCAAGGCG TTCGGCATCT GGGGGATCGT CTTCGGCATC
GGGCTCGGCT TCGGACCGCT GATCGGTGGC CTGATCGTCG CCATGTCCGG TTGGAAGTGG
GTCTTCTGGG TGCATGTTTT CATCGCGGCC CTGACATTCG GCCTTGCCAT CGTCGGCGTG
CGCGAATCAC GCGATCCGCA TGCAAGGAGA TTGGACCTGG CTGGCATCGT CACCCTATCC
CTCACGGTGC TGGGGCTTGC CTACTTCGTG ACGCAGGGCG CCGACACAGG TTTCGGCAGC
GCTTCCGCCC TGAGGGTGAT TGCAGCGACT GCGGTCAGTT TTGCGCTATT CCTTATCGTG
GAAATGCGCG CCGCGCACCC GATGTTCGAC TTCTCGGTAT TCCGGGTGCG CAATTTCTCG
GGCGCGTTGC TTGGCTCAGT GGGCATGAAC TTCAGCTTCT GGCCGTTCAT CATCTACCTG
CCCATTTACT TCCAGAGTGC GCTGGGGCAA GGTGCAGCGG CAGCAGGCGT GTCGCTGCTG
GCCTATACCC TGCCTACGCT GGTGTTCCCA CCCATCGGCG AGCGGCTGGC GTTGCGCTAC
CGGCCCGGCA TCGTCATTCC CGCCGGCTTG TTCACCATCG GGCTGGGGTT CTTCCTGATG
CTCATTGGCA GCAGCATCGA TCAGGCGAGT TGGCTGACCG TACTGCCAGG CTGCCTGCTG
GCTGGCGCGG GCTTGGGCAT CACCAATACG CCTGTGACCA ACACCACCAC GGGCTCGGTG
TCGCCCGCAC GCGCCGGTAT GGCGTCCGGC ATCGACATGA GCGCCCGCAT GATCTCCCTG
GCCATCAACA TTGCTTTGAT GGGATTTCTG CTGATGCAAA GGGTGCTGCA ATATCTGCAA
ATCGCGCTGG TCAAACCGGC CGACGAAGCA TCCTGGCGCG CGCTGGCCAG CCGTATTGCG
TCCGGGAATT TGCATGCCGC TGACGCTACC GCGTGGGCGC CCATGTCCCC AGAGACGCTG
GAGACAATCG GCCGCGCGGC GCTAGTGCAC GGCTTCGGCG GGGTCATGCT CTACAGCGGC
ATCGCTGTCT GGGTGCTCGC TGCTGCCAGC TTCCTGATCT TCTCCGGCAG AAAGGCGCAG
CGATGA
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| Protein sequence | MQAHDIEQPT RPQTDHPFAA RNTVALLAVC LAALMFGLEI SSVPVILPTL EVALHGDFSG
IQWIMNAYTI ACTAVLMATG TLADRYGRKR VFLYTIALFG VASLLCGLAW NTPILIASRF
LQGASGGAML ICLVAVLSHQ FPEGAERGKA FGIWGIVFGI GLGFGPLIGG LIVAMSGWKW
VFWVHVFIAA LTFGLAIVGV RESRDPHARR LDLAGIVTLS LTVLGLAYFV TQGADTGFGS
ASALRVIAAT AVSFALFLIV EMRAAHPMFD FSVFRVRNFS GALLGSVGMN FSFWPFIIYL
PIYFQSALGQ GAAAAGVSLL AYTLPTLVFP PIGERLALRY RPGIVIPAGL FTIGLGFFLM
LIGSSIDQAS WLTVLPGCLL AGAGLGITNT PVTNTTTGSV SPARAGMASG IDMSARMISL
AINIALMGFL LMQRVLQYLQ IALVKPADEA SWRALASRIA SGNLHAADAT AWAPMSPETL
ETIGRAALVH GFGGVMLYSG IAVWVLAAAS FLIFSGRKAQ R
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