Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2321 |
Symbol | |
ID | 1221166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2520613 |
End bp | 2521440 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637238720 |
Product | dehydrogenase/reductase oxidoreductase protein |
Protein accession | NP_520442 |
Protein GI | 17547040 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.195083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATT GTTTCGATTT TCGCGGAAAA ACAGCACTCA TCACGGGTGC ATCGTCGGGT ATCGGGCGCG AGTTCGCCTA TGCGTTAGCC AAACGTGGCG CGAAACTTCT GCTGGTTGCA CGCTCTCGCG ACAAGCTGCA CGATCTGACC GCTGAATTGC GACGCGACTA CGCCTGCGAC GCAGATTTCC TGACGGTTGA CCTGAGCGCA CCTGACGCCA TCCCTACGGT GGCGCATCTT CTCAAGGCGA CCGGCACGGT CGTCGATGTC CTCATCAACA ACGCGGGCTT TGCGACTTAC GGACGCTTCG AAACGATTCC GTGGACGCGC CAACGCGATG AAGTGCTGGT GAACTGCATG GCAGCGATCG AGTTGACGCA TCTTCTGCTG CCGGGGATGC AGGCACGATC CGATGGCGCA GTCATTAACG TCGCGTCAAC AGCCGCATTC CAGCCCGATC CTTATATGGC GATCTACGGC GCCACCAAGG CCTTTCTTTT GTCATTTTCA GAAGCCGTTT GGGCTGAGAA CCGGCATCGC GGCATTCGGG TTCTCGCGCT ATGTCCCGGC GCGACGCAAA CCGGCTTTTT TGATGTCGTT GGCGCAAAGG AAGCGGCTGT CGGCACGCCG ATGCCTGTCG CGAGCGTGGT GCAGGACGCA CTGTGGGCGC TGGATCGCAA TCGGAGCTAT CGGATTGTTG GGACACAGAA TCGGCTGCTT GCCAATTTGC AAAGGCTGTT GAGCCGCGAG ATGTCGGCAC GCCTGGTTGA GAAAATCCTT CGACCGAGAG GCGCTCAGGA ACTGGAGACA GGAGATACCA GCGCGTAG
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Protein sequence | MKNCFDFRGK TALITGASSG IGREFAYALA KRGAKLLLVA RSRDKLHDLT AELRRDYACD ADFLTVDLSA PDAIPTVAHL LKATGTVVDV LINNAGFATY GRFETIPWTR QRDEVLVNCM AAIELTHLLL PGMQARSDGA VINVASTAAF QPDPYMAIYG ATKAFLLSFS EAVWAENRHR GIRVLALCPG ATQTGFFDVV GAKEAAVGTP MPVASVVQDA LWALDRNRSY RIVGTQNRLL ANLQRLLSRE MSARLVEKIL RPRGAQELET GDTSA
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