Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2260 |
Symbol | |
ID | 1221105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2451752 |
End bp | 2452501 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238659 |
Product | amino-acid ATP-binding ABC transporter protein |
Protein accession | NP_520381 |
Protein GI | 17546979 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.334703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.463936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGA TCACCATCGA GCATGTCGAC AAGTGGTACG GCGACTACCA CGCGCTGGTC GACGTCAACG AAACCGTCGC CAAGGGAGAA GTCGTGGTGG TGTGCGGGCC GTCGGGCTCG GGCAAGTCCA CGCTGATCCG CACGCTGAAC CGGCTGGAGG CCATCCAGAA GGGCCGCATC ACCGTCAACG GCCAGGACGT GCATGCGCAC GGCGTGAACG TGAACGTGCT GCGCAGCGGC ATCGGCTTCG TGTTCCAGCA ATTCAACCTG TTCCCGCACC TGACCGTGAT GCAGAACTGC ACGCTGGCGC CGGTGCGGCT CAAGCGCCTG CCGCCGCAGG AGGCGAAGGA TTTCGCCATG CGCCTGCTGG AACGCGTCGG CCTGCCGCAC AAGGCGGACG CCTATCCCGG CGAGCTGTCG GGCGGCCAGC AGCAGCGCGT GGCCATCGCG CGCGCGCTGG CGATGAAGCC GCCGGTGATG CTGTTCGACG AGCCGACCTC GGCGCTCGAC CCGGAAATGG TCAACGAGGT GCTGCTGGTC ATCAAGGACC TCGCCCGCGA CGGCATGACC ATGATGTGCG TCACGCACGA AATGGGCTTC GCGCGCGAGG TGGCCGACCG GGTGCTGTTC ATGGACCACG GCGAGATCCT GGAGCGGGCC CGGCCGGAAG ACTTCTTCCT GCGCCCGCAG CATCCGCGCG CGCAGCGCTT CCTGGCCGAC ATCCGCTCGC CGTGGGGCGC GCCGGCCTGA
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Protein sequence | MNMITIEHVD KWYGDYHALV DVNETVAKGE VVVVCGPSGS GKSTLIRTLN RLEAIQKGRI TVNGQDVHAH GVNVNVLRSG IGFVFQQFNL FPHLTVMQNC TLAPVRLKRL PPQEAKDFAM RLLERVGLPH KADAYPGELS GGQQQRVAIA RALAMKPPVM LFDEPTSALD PEMVNEVLLV IKDLARDGMT MMCVTHEMGF AREVADRVLF MDHGEILERA RPEDFFLRPQ HPRAQRFLAD IRSPWGAPA
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