| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2258 |
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| Symbol | |
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| ID | 1221103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2450365 |
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| End bp | 2451060 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238657 |
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| Product | amino acid ABC transporter transmembrane protein |
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| Protein accession | NP_520379 |
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| Protein GI | 17546977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.964648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATT TCGATCTGTC GATGCTGCTG TCGGGGCAGT ATCACCAGTG GCTCGTCACC
GGTTTCCAGC TGTCGATCAA GCTGACCGCG CTGGCCTTCG TGCTGGCCCT GCCGCTGGCC
ATCGCGGTGG CGCTGCTGCG CCTGGCGCCG GCGGCGCCGC TGCGGGCGGT CGGCCAGGCC
TATGTCGAGG CCATCCGCAA CGTGCCGCTG CTCGCCCACA TGCTGTTCTG GTACTTCGGC
GCGCCGCAGC TGCTGCCGAT GTCCGTCAAG ACCTGGCTCT ACAACCTCAA TTACGAAGCG
GCGAGCGCGG TCATCGCGCT CGTGCTCTAT ACGGCCGCCT ACATGGCGGA GGACATCCGC
AGCGGCCTGC GCTCGATCCC GAAGGAGCAG TTCGAGGCCA GCCGCGCGCT GGGCCTGAGC
TTCCTGCAGG CCATGCGGCT GGTGGTGCTG CCGCAATCGC TGCGCGTGAC CGTGCCGCCG
CTGGTCAGCC AGACGCTGAA CCTGTGGAAG AACTCCAGCA TCGCCATGGT GATCGGCGTG
GCGGAGCTGA TGTACCAGGC GCAGCAGGTG GAAAGCGCCA CCTTCCGCGG CTTCGAGGCG
TTCGCCTTCG CCACGGCGGC CTATCTGTCC ATTTCGATGG CGATCACGGT GTTTTCGGCG
TGGTACCAGC ATCGCTACCC CGTGCGGACC CTGTGA
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| Protein sequence | MPNFDLSMLL SGQYHQWLVT GFQLSIKLTA LAFVLALPLA IAVALLRLAP AAPLRAVGQA
YVEAIRNVPL LAHMLFWYFG APQLLPMSVK TWLYNLNYEA ASAVIALVLY TAAYMAEDIR
SGLRSIPKEQ FEASRALGLS FLQAMRLVVL PQSLRVTVPP LVSQTLNLWK NSSIAMVIGV
AELMYQAQQV ESATFRGFEA FAFATAAYLS ISMAITVFSA WYQHRYPVRT L
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