Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2250 |
Symbol | pcaD |
ID | 1221095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2442420 |
End bp | 2443232 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637238649 |
Product | B-ketoadipate enol-lactone hydrolase transmembrane protein |
Protein accession | NP_520371 |
Protein GI | 17546969 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0146051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGGC TTGAACACGA CAACGTCCGC CTCTACCACG AATTCGACGA TGGCCCTGCC CCGGCCAAGC CGGTGCTGGT GCTGTCCAAC TCGCTCGGCA CCGATCTCGG CATGTGGGCG CCGCAGCTGG AGGCGCTGCG CCGGCATTTC CGGCTGCTGC GCTACGACAC CCGCGGCCAC GGCCGGTCGA GCGTGCCCGA CGCGCCGTTC GGCGTGGCGC AGCTCGGCGG CGACGTGCTG GCGCTGCTCG ACCACTACGA CATTGAATTC GCGCTGTTCT GCGGCCTGTC GATGGGCGGC GTGACCGGCC TGTGGCTCGC CGCGCATCAC GGCGAGCGCT TTCCGCGCAT GGTGGTCAGC AACACCGCCG CGCAGATCGG CACCCAGCAG AGCTGGAACG CCCGCATCGC GCAGGTGGAG CAGCGCGGCA TGGGTGCCAT TACCGAAACG GTGCTCGAGC GCTGGTTCAC CGATGGCTAC CGCGTCGCCG CGCCGGCGCG CGTCGACCTC GTCAAGGCGA TGCTGCTGGC GACGCCGCCG GCCGGCTACA ACGGCAATTG CGCCGCCATC CGCGACGCCG ACCTGCGCGC GCAGCTCGAG GCCATCCGCG TGCCGCTGCT CGCCATCGGC GGCACGCACG ACATCTCGAC GCCGGCCGCG CAGACCCGGG CGATCGCGCA GGGCGTGCCC GGCGCGCAAT ACGTGGAGCT GTCCGCCGGC CATCTCGCCA ACTGGGAGCA GGCCGAGGCC TATACCGATG TGCTGGTCGG CTTCCTGACC ACCGGCGTCG CGCGCGAGGC CGTCCATGGA TGA
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Protein sequence | MPWLEHDNVR LYHEFDDGPA PAKPVLVLSN SLGTDLGMWA PQLEALRRHF RLLRYDTRGH GRSSVPDAPF GVAQLGGDVL ALLDHYDIEF ALFCGLSMGG VTGLWLAAHH GERFPRMVVS NTAAQIGTQQ SWNARIAQVE QRGMGAITET VLERWFTDGY RVAAPARVDL VKAMLLATPP AGYNGNCAAI RDADLRAQLE AIRVPLLAIG GTHDISTPAA QTRAIAQGVP GAQYVELSAG HLANWEQAEA YTDVLVGFLT TGVAREAVHG
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