| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2197 |
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| Symbol | cafA |
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| ID | 1221041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2378337 |
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| End bp | 2379806 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238595 |
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| Product | ribonuclease G |
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| Protein accession | NP_520318 |
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| Protein GI | 17546916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG ACATCCTCGT CAATATCACC CCGCAAGAAA CGCGCGTAGC CATCGTCCAG
CAGGCCGCCG TCCAGGAACT CCACATCGAA CGCACGCTGA CGCGCGGGCT GGTCGGCAAC
ATCTATCTCG GCAAGGTCGT GCGCGTGCTG CCGGGCATGC AGTCGGCCTT CATCGACATC
GGGCTGGAGC GCGCGGCCTT CCTGCACGTG GCCGACATCT GGCACCCGCG CGAAGCCAAG
GACGCCCCGG CCGCCCCGCA CGTCGCCATC GAGAAGACGC TGTTCGAAGG CCAGGCGCTG
ACGGTGCAGG TCATCAAGGA CCCGATCGGC ACCAAGGGCG CGCGGCTGTC CACGCAGATC
AGCATCGCCG GCCGCACGCT GGTCTACCTG CCGCAAGACC CGCACATCGG CATCTCGCAG
AAGATCGGCA ACGAGACCGA CCGCGAGGCG CTGCGCCAGC GCGTGACCCG CATGGTGCCG
GCCGACGAGC GCGGCGGCTT CATCGTGCGC ACCATCGCCG AGGAAGCCAC CGACGAAGAA
CTGGCCAACG ACGTCGCCTA CCTGCGCAAG ATCTGGGCGA CCATCCGCCA CAACGCCACT
ACCCTGCCCG CGCCGTCGAT CCTGTACCAG GACCTGAACC TCGCCCAGCG CGTGCTGCGC
GATTTCGTGA CCGACGACAC GCGCAGCATC CAGATCGATT CGCGCGAGAA CTACCAGAAG
CTGATCGAGT TCGCGCAGGA ATACACGCCC GCCGTGGTGG AGCGCCTGAC CCACTACACC
GGCGAGCGGC CGATCTTCGA TCTGTACAAC ATCGAGGCGG AGGTCGAGCG CGCGCTGTCG
CGCCGGGTCG ACCTGAAGTC CGGCGGCTAC CTGATGATCG ACCAGACCGA GGCGATGACG
ACCATCGACG TCAACACCGG CGGCTACGTG GGCGCGCGCA ACTTCGACGA CACCATCTTC
AAGACCAACC TGGAAGCGGC GCACACCATC GCGCGCCAGC TGCGGCTGCG CAACCTGGGC
GGCATCATCA TCATCGACTT CATCGACATG GAGTCCGGCG AGCACCGCGA CGCCGTGCTG
GCCGAGCTGC GCCGCGCGCT GGCGCGCGAC CGCACGCGCA TCACGGTCAA CAGCTTCTCG
CAGCTGGGCC TGGTGGAGAT GACCCGCAAG CGCACGCGCG AATCGCTCGC GCACGTGCTG
TGCGAGCAGT GTCCGGTGTG CCAGGGCAAG GGCCAGGTGA AGACGCCGCG CACGGTGTGC
TACGACATCC TGCGCGAGAT CATGCGCGAA TCCCGCCAGT TCAACCCGCG CGAGTTCCGC
ATCCTCGCCT CGCAGTCGGT GATCGATCTG TTCCTGGAAG AGGAAAGCCA GCATCTGGCG
ATGCTGGGCG ACTTCATCGG CAAGCCGATC TCGCTGCAGG TGGAATCGGC GGCGGCTAGC
CAGGAGCAGT ACGACATCAT TTTGATGTGA
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| Protein sequence | MSEDILVNIT PQETRVAIVQ QAAVQELHIE RTLTRGLVGN IYLGKVVRVL PGMQSAFIDI
GLERAAFLHV ADIWHPREAK DAPAAPHVAI EKTLFEGQAL TVQVIKDPIG TKGARLSTQI
SIAGRTLVYL PQDPHIGISQ KIGNETDREA LRQRVTRMVP ADERGGFIVR TIAEEATDEE
LANDVAYLRK IWATIRHNAT TLPAPSILYQ DLNLAQRVLR DFVTDDTRSI QIDSRENYQK
LIEFAQEYTP AVVERLTHYT GERPIFDLYN IEAEVERALS RRVDLKSGGY LMIDQTEAMT
TIDVNTGGYV GARNFDDTIF KTNLEAAHTI ARQLRLRNLG GIIIIDFIDM ESGEHRDAVL
AELRRALARD RTRITVNSFS QLGLVEMTRK RTRESLAHVL CEQCPVCQGK GQVKTPRTVC
YDILREIMRE SRQFNPREFR ILASQSVIDL FLEEESQHLA MLGDFIGKPI SLQVESAAAS
QEQYDIILM
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