| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2172 |
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| Symbol | |
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| ID | 1221016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2354779 |
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| End bp | 2356002 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238570 |
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| Product | drug transport transmembrane protein |
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| Protein accession | NP_520293 |
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| Protein GI | 17546891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.309598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTC CCGATTCCAG ACGCGCTCGC CTGCCCCGCC TGCGCGGCGC CATTCCCGGC
TGGCTTCTGC TGCTGGGCGC GCTGACCGCC ATCGGTCCGC TATCGGTCGA CATGTACCTG
CCGAGCCTGC CCACCATCGC GCGCGATCTC AGGACGTCGT CGGCAGCGGC GGGGATCACG
CTCACGGCGT TCCTGGTCAG CCTGGCGATC GGCCAGCTGA TCTACGGCCC GGCCAGCGAC
CGCTTCGGCC GCAAGCCCCC GCTCTATATC GGCCTGGCCC TGTACGTGGC GGCGTCGGTC
GGCTGCGCGT TCGCCACCGA TGCCACCATG CTGGCCGTGC TGCGCGCCGT GCAGGGGTTC
GGCGGCTGCG CGGGCATGGT GATCTCGCGC GCGGCCGTGC GCGACCGGAT GGACCCGGCC
GGCGCGGCGC AGGCCTACTC CACGCTGATG CTGGTGATGG GCGTGGCGCC CATTCTCGCG
CCGATGATCG GCGGGGCGGT GCTGCAGGTG ACCTCGTGGC GGATGATCTT CGCGGTGCTG
GCGGCGTTCG GCGTGCTGTC GCTGGCGGCG GTGCATTTTC TGATGCGCGA GTCGCTGGAT
GCGGCGCACG CGCGGCCGCT GGCCGTCGGC CGGGTGCTGC GCGACTACTG GGAACTGCTG
CGCGATCGCC ATTACGCCGC CTATACGGCG TGCGGCGCGG TATTCGTGTC GGGCATGTTC
GCCTACATCA CCGCCTCGCC GTTCGTGCTG ATCGACCATT ACGGATTGAG CCCGTCGCAC
TATGCGTGGG TGTTCGGCAG CAATGCGGCG GGCATGATTG CAGCCTCCCG GATCAATGTG
CGGCTGATGC GCCGGTCTAC GCCGGCCCGG GTGCTGCGCC GCGCGCTGTG GATGCCGGCC
GCGACGAGCG TGGCGGCTGC CGCGGTGGTC GGCGCCGGTT TCATGCCGCT GCCGCTGGTG
CTGGCGGCGC TGTTCTGTTA CGTCGCCTCG ATCGGCTGCA TTTCGCCCAA CACGGGCGCG
CTTGCCATGG CCGGGCAGGG GGCCCGCGCC GGCACGGGCT CGGCGCTGAT GGGCGCCATG
CAGTTCGGCC TGGGCATGGT CACCGGCACG GTGGTCGCCG CGTTCGGGCA GGGCGCGGCA
CCGTTGCTGG GCATGATGGC GGTCAGCGCC GTGCTGGCCC TGTGGCTCGG CCTGCGCGCC
ACGCAGCACG AGCACGGCGG CTGA
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| Protein sequence | MTAPDSRRAR LPRLRGAIPG WLLLLGALTA IGPLSVDMYL PSLPTIARDL RTSSAAAGIT
LTAFLVSLAI GQLIYGPASD RFGRKPPLYI GLALYVAASV GCAFATDATM LAVLRAVQGF
GGCAGMVISR AAVRDRMDPA GAAQAYSTLM LVMGVAPILA PMIGGAVLQV TSWRMIFAVL
AAFGVLSLAA VHFLMRESLD AAHARPLAVG RVLRDYWELL RDRHYAAYTA CGAVFVSGMF
AYITASPFVL IDHYGLSPSH YAWVFGSNAA GMIAASRINV RLMRRSTPAR VLRRALWMPA
ATSVAAAAVV GAGFMPLPLV LAALFCYVAS IGCISPNTGA LAMAGQGARA GTGSALMGAM
QFGLGMVTGT VVAAFGQGAA PLLGMMAVSA VLALWLGLRA TQHEHGG
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