Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2153 |
Symbol | spoT |
ID | 1220996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2335348 |
End bp | 2337555 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238550 |
Product | bifunctional (P)ppGpp synthetase II/guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase |
Protein accession | NP_520274 |
Protein GI | 17546872 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000522394 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCGGGC CGACCTCGCA GCCGGCCGCG CCGCCGCGCC AGCAGGTGGT CTCCATCGCG GGGCTGACGG AGAAGCTGTC GTACCTGAAG CCGGCCGACA TCAAGCTGGT GAAGGAAGCC TTCCACTTCT CCGACGAGGC GCACCTCGGC CAGTACCGCC AGAGCGGCGA GCCGTACATC ACGCACCCGG TGGCGGTGGC GGAAATCTGC GCGGGCTGGA AGCTGGACGT GCAATCGATC ATGGCCGCGC TGCTGCACGA CGTGATCGAG GACCAGGGCG TCACCAAGAG CGAACTGGCC GAGAAGTTCG GCCCCAAGGT CGCGGAGCTG GTCGACGGCC TCACCAAGCT GGACAAGCTC GAATTCCAGA GCCGCGAGCA GGCGCAGGCG GAGAGCTTCC GCAAGATGCT GCTGGCGATG GCGCGCGACG TGCGCGTGAT CCTGGTCAAG CTGGCCGACC GCACGCACAA CATGCGCACG CTCGACCACG TGCCGCCCGA AAAGCGCCGC CGCATCGCCG GCGAGACGAT GGAGATCTAC GCGCCGATCG CGCACCGGCT CGGGCTCAAT ACCACGTACC GCGAACTGCA GGAGTTGAGC TTTCGCATCG GCTCGCCGTT CCGCTATGCC ACGCTGGAGA AGGCCGTCAA GGCCGCGCGC GGCAACCGGC GCGAGGTGGT CAGCCGCATC CTGGAGGCCG CGCAGCGCGC CCTGGGCGAC GCGGGCGTTT CGGCCGAGCT GACCGGCCGC GAGAAGACGC TCTACAGCAT CTACCGCAAG ATGCACGACA AGCAGCTGTC GTTCTCGCAG GTGCTGGATG TGTACGGCTT CCGCGTGGTG GTCGAGACGC AGATGCACTG CTACATGGCG GTGGGCGCGC TGCACGGTCT GTACAAGCCG ATGCCCGGCA AGTTCAAGGA CTACATCGCC ATCCCCAAGA TCAACGGCTA CCAGTCCGTG CACACCACGC TGGTGGGGCC GTTCGGCACG CCGGTCGAAT TCCAGATCCG CACGCGCGAG ATGAACCAGA TCGCCGAGGC TGGAGTGGCG GCGCACTGGA TGTACAAGCA GCACCACGAC GAGCCGGATC GCGCGCAGCA GCAGGCGCAC CAGTGGCTGC AGTCGCTGCT CGATATCCAG AGCCAGAGCG GCGATTCGCA GGAGTTCCTG GAGCACGTCA AGATCGACCT GTTCCCGGAT GCCGTCTACG TGTTCACGCC CAAGGGCGAG ATCCGCGCGC TGCCGCGCGG CGCCACGGCG TTGGACTTCG CCTATGCCGT GCACAGCGAC CTGGGCAACC AGTGCGTGGC GGTCAAGATC AACAATGCGC TGCTGCCGCT GCGTACCGAG CTCAAGAACG GCGATATCGT CGAGGTGGTG ACGGCGCCGT ACTCCAAGCC GAACCCGGCG TGGCTCACGT TCGTGCGTAC CGGCAAGGCG CGCGCGGCGA TCCGCCATTT CCTGAAGACC GCCAAGCTGG ACGAAGCCAT TCAGCTGGGC GAGCGGCTGC TGGAGCAGGC GCTGCGCCAG CTGGGCATCG ACATGAAAGC CGTGCCCGCG CAGGTGTGGG AGCGGATCGT GCAGTGGACC GGCAACAAGG CGCGCGAAGA CATCTTCGCC GACCTGGCGC TGGGCCGGCG CGTGGCCGCC GTGGTGGCGC GGCGCATCGA GATCGGGTTG CAGGAGGGCG GGCACGAGGG CGATGAAGCG CTGATCGCCG CCGTCCACGC CTTCGCCGGC GAAGAGGCGC CCGCCGTGAC GGTCAGCGGC GACGAAGGCA TGGCCATGGT GTTCTCGCCG TGCTGCCGGC CGATTCCCGG CGACCCGATC GTCGGCTACA TCGGCAAGGG CGAAGGGCTG CAGATCCACG TGGAAGAATG TCGCGTGGCC AAGCGCCTGC ACGGCAAGGA TCCGGAGCAC TGGATCGACG TCATGTGGGC GGAGCACACC ACGCGCGCCT TCGATGTGTC GATCAAGGTG CTGGTGCGCA ATACCAAGGG CATTCTCGCG CGGGTGGCCG CGGACCTGAC CTCGGCCGAT GCCAACGTCG CGCATGTGTC GATGGAGCAG GAGGGTGGTG GCCAGGAAGC CACGTACATG ACCTTCCTGA TCCAGGTGCA TGACCGCGTG CACCTGGCCG ACGTGATGCG TGCGCTGCGA CGCAACCTCG ATGTGATCCG CATCGCGCGG GACCGGGGTG GAGAGTAG
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Protein sequence | MFGPTSQPAA PPRQQVVSIA GLTEKLSYLK PADIKLVKEA FHFSDEAHLG QYRQSGEPYI THPVAVAEIC AGWKLDVQSI MAALLHDVIE DQGVTKSELA EKFGPKVAEL VDGLTKLDKL EFQSREQAQA ESFRKMLLAM ARDVRVILVK LADRTHNMRT LDHVPPEKRR RIAGETMEIY APIAHRLGLN TTYRELQELS FRIGSPFRYA TLEKAVKAAR GNRREVVSRI LEAAQRALGD AGVSAELTGR EKTLYSIYRK MHDKQLSFSQ VLDVYGFRVV VETQMHCYMA VGALHGLYKP MPGKFKDYIA IPKINGYQSV HTTLVGPFGT PVEFQIRTRE MNQIAEAGVA AHWMYKQHHD EPDRAQQQAH QWLQSLLDIQ SQSGDSQEFL EHVKIDLFPD AVYVFTPKGE IRALPRGATA LDFAYAVHSD LGNQCVAVKI NNALLPLRTE LKNGDIVEVV TAPYSKPNPA WLTFVRTGKA RAAIRHFLKT AKLDEAIQLG ERLLEQALRQ LGIDMKAVPA QVWERIVQWT GNKAREDIFA DLALGRRVAA VVARRIEIGL QEGGHEGDEA LIAAVHAFAG EEAPAVTVSG DEGMAMVFSP CCRPIPGDPI VGYIGKGEGL QIHVEECRVA KRLHGKDPEH WIDVMWAEHT TRAFDVSIKV LVRNTKGILA RVAADLTSAD ANVAHVSMEQ EGGGQEATYM TFLIQVHDRV HLADVMRALR RNLDVIRIAR DRGGE
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