Gene RSc2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2081 
Symbol 
ID1220922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2253893 
End bp2254423 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content72% 
IMG OID637238476 
Producthypothetical protein 
Protein accessionNP_520202 
Protein GI17546800 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.820428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA CCTCTCCTGC TTCCCCCGCC GCCTCCGGCG GTGCGATCGA TGCATCGACC 
GCACCGCCCC TGCGCCGGCG CCTTGCCGCG ATGCTCTATG AAGGCCTGCT GCTGTTCGGC
GTGCTGTTCG GCGCCACGGC CCTCTTCCTG GTCCTGCGCG CGATCGTGCC GCCGCTGGCG
CGCACGGGCG ACGTGGGGCT GCAGGTCTGG GGCTTCCTTG CGCTCGGGCT GTATTTCGTC
GGGTTCTGGC GCAAGCGCGG GCAGACGCTG GCGATGCAGA CGTGGCGCAT CCGCCTGGTG
AGTGCGGACG GCGCGCCGGT ATCGCTCGGG CAAGCCATTG CGCGCTACCT GCTGGCGTGG
ATCTGGGTGG CCGTGGCGGC CGGTGTCATC CATGTCAGCG GACTCTCGCG CTGGGCGGGG
GCCGGCGTCG CGCTGGCATG CGTGCTGGCG TGGGCCGCGC TGGCCTGGCT CGATCCGCGG
CGCCAGTTCC TGCATGATCG GCTGGCCGGC ACGCGGCTGA TACGCGACTG A
 
Protein sequence
MAATSPASPA ASGGAIDAST APPLRRRLAA MLYEGLLLFG VLFGATALFL VLRAIVPPLA 
RTGDVGLQVW GFLALGLYFV GFWRKRGQTL AMQTWRIRLV SADGAPVSLG QAIARYLLAW
IWVAVAAGVI HVSGLSRWAG AGVALACVLA WAALAWLDPR RQFLHDRLAG TRLIRD