Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2081 |
Symbol | |
ID | 1220922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2253893 |
End bp | 2254423 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238476 |
Product | hypothetical protein |
Protein accession | NP_520202 |
Protein GI | 17546800 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.820428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCA CCTCTCCTGC TTCCCCCGCC GCCTCCGGCG GTGCGATCGA TGCATCGACC GCACCGCCCC TGCGCCGGCG CCTTGCCGCG ATGCTCTATG AAGGCCTGCT GCTGTTCGGC GTGCTGTTCG GCGCCACGGC CCTCTTCCTG GTCCTGCGCG CGATCGTGCC GCCGCTGGCG CGCACGGGCG ACGTGGGGCT GCAGGTCTGG GGCTTCCTTG CGCTCGGGCT GTATTTCGTC GGGTTCTGGC GCAAGCGCGG GCAGACGCTG GCGATGCAGA CGTGGCGCAT CCGCCTGGTG AGTGCGGACG GCGCGCCGGT ATCGCTCGGG CAAGCCATTG CGCGCTACCT GCTGGCGTGG ATCTGGGTGG CCGTGGCGGC CGGTGTCATC CATGTCAGCG GACTCTCGCG CTGGGCGGGG GCCGGCGTCG CGCTGGCATG CGTGCTGGCG TGGGCCGCGC TGGCCTGGCT CGATCCGCGG CGCCAGTTCC TGCATGATCG GCTGGCCGGC ACGCGGCTGA TACGCGACTG A
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Protein sequence | MAATSPASPA ASGGAIDAST APPLRRRLAA MLYEGLLLFG VLFGATALFL VLRAIVPPLA RTGDVGLQVW GFLALGLYFV GFWRKRGQTL AMQTWRIRLV SADGAPVSLG QAIARYLLAW IWVAVAAGVI HVSGLSRWAG AGVALACVLA WAALAWLDPR RQFLHDRLAG TRLIRD
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