Gene RSc2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2014 
SymbolpaaG2 
ID1220854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2193272 
End bp2194051 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID637238408 
Productenoyl-CoA hydratase 
Protein accessionNP_520135 
Protein GI17546733 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.49745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0415975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC AACTGCTCTC CCGACGCACC GGCTCCACGC TGGTGCTGAC GCTCTCCAAC 
CCCGACGCGC GCAACGCGCT GGACCCGGTG ATGTACACCG CGTCGATGGA GGCCCTCAAC
CTCGCCGCCA AGGACAAGGA GATCCGCAGC GTGATCTTCA CCGGCGCGGA CGGCGCCTTC
TGCGCCGGCG GCAACCTCAA CCGCCTGCTG GAGAACCGCA GCAAGCCCAA GCACGTGCAG
GAAGAAGGCA TCGATGCGCT CAACCACTGG ATCGAGACCA TCCGCACCTT CCCCAAGCCG
GTGATCGCGG CGGTGGAGGG CCCGGCGGCG GGCGCGGGCT TCTCGCTGGT GCTGGCGTGC
GATTTCGTGG TGGCCGCCGC GGATGCCAAG TTCGTGATGG CCTACGTGAA CGTGGCGCTG
ACGCCGGACG GCGGCGGCTC GTGGCACATC GCCCGCTTCC TGCCGCGCCC GCTGGCCAGC
GAGATCATCA TGCTGGGCAA GCCTGTCAGC GCGGAGCGGC TCGCGCATTT CGGGCTGGTC
AACGAGGTGG TCCGGCCCGG CGCAGCCCTG GACCGCGCGC TGCTGCTGGC CGAGCAATTG
GCCGCGCAGT CGCCGCACGC GGTCGGTCGC ATCAAGGGGC TGATCGCGCA TGCGGAGGAG
GCCTCGCTGC ACGCGCACCT GCAGGCCGAG CAGCACAGCT TCGTCGAAGC GCTGCACCAC
GCCGACGGCA ACGAAGGCAT TTCGGCCTTC CTGCACAAGC GCCAACCCCA GTACCGCTGA
 
Protein sequence
MTAQLLSRRT GSTLVLTLSN PDARNALDPV MYTASMEALN LAAKDKEIRS VIFTGADGAF 
CAGGNLNRLL ENRSKPKHVQ EEGIDALNHW IETIRTFPKP VIAAVEGPAA GAGFSLVLAC
DFVVAAADAK FVMAYVNVAL TPDGGGSWHI ARFLPRPLAS EIIMLGKPVS AERLAHFGLV
NEVVRPGAAL DRALLLAEQL AAQSPHAVGR IKGLIAHAEE ASLHAHLQAE QHSFVEALHH
ADGNEGISAF LHKRQPQYR