| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1998 |
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| Symbol | mdh |
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| ID | 1220838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2174783 |
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| End bp | 2175772 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238392 |
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| Product | malate dehydrogenase |
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| Protein accession | NP_520119 |
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| Protein GI | 17546717 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.304993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.280791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAAG CACCCATGCG CGTCGCGGTG ACCGGCGCTG CTGGTCAGAT CGGTTATGCA
CTGCTGTTCC GCATCGCCGC CGGCGAAATG CTGGGCAAGG ATCAACCCGT CATCCTGCAA
CTGCTGGAAA TCCCCGACGA GAAGGCCCAG AAGGCGCTCA AGGGCGTGAT GATGGAGATC
GAAGACTGCG CCTTCCCGCT GCTGGCCGGC ATGGAAGCCC ACGCCGACCC GATGACCGCC
TTCAAGGACG TGGACGTGGC CCTGCTGGTC GGCGCCCGCC CCCGCGGCCC TGGCATGGAG
CGCAAGGACC TGCTGTCGGC CAACGCACAG ATCTTCACGG CACAGGGCAA GGCCCTGAAC
GCCGTCGCTT CGCGCAACGT CAAGGTGCTG GTGGTCGGCA ACCCGGCCAA CACCAACGCC
TACATCGCCA TGAAGTCGGC ACCGGACCTG CCGCGCGAGA ACTTCACCGC GATGCTGCGC
CTGGACCACA ACCGCGCCCT GTCGCAGATC GCCGCCAAGA CCGGCAAGCC GGTGTCGAGC
ATCGAAAAGC TGTTCGTGTG GGGCAACCAC AGCCCGACGA TGTACGCCGA CTACCGCTAC
GCCACTATCG ACGGCCAGAG CGTGAAGGAC ATGATCAACG ACCCGGTGTG GAACAACGAC
GTGTTCCTGC CGACCGTCGG CAAGCGCGGC GCCGCCATCA TCGAGGCGCG CGGCCTATCG
TCGGCTGCCT CGGCCGCCAA CGCCGCCATC GACCACGTGC GCGACTGGGT ACTGGGCTCC
AACGGCAAGA TCGTCACGAT GGGCATCCCG TCCAACGGCG ACTACGAGAT CCCGCAGGAC
GTGATGTTCG GCTTCCCGGT CACGACGGCC AACGGCAAGT ACGAAGTGGT CAAGGGCTTC
GAGGTCGACG CCTACAGCCG CGAGAAGATC AACATCACGC TCAAGGAACT GGAAGAAGAG
CGTGCCGGCG TGCAGCACCT GCTGGGCTGA
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| Protein sequence | MAKAPMRVAV TGAAGQIGYA LLFRIAAGEM LGKDQPVILQ LLEIPDEKAQ KALKGVMMEI
EDCAFPLLAG MEAHADPMTA FKDVDVALLV GARPRGPGME RKDLLSANAQ IFTAQGKALN
AVASRNVKVL VVGNPANTNA YIAMKSAPDL PRENFTAMLR LDHNRALSQI AAKTGKPVSS
IEKLFVWGNH SPTMYADYRY ATIDGQSVKD MINDPVWNND VFLPTVGKRG AAIIEARGLS
SAASAANAAI DHVRDWVLGS NGKIVTMGIP SNGDYEIPQD VMFGFPVTTA NGKYEVVKGF
EVDAYSREKI NITLKELEEE RAGVQHLLG
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