| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1988 |
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| Symbol | leuB1 |
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| ID | 1220828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2164945 |
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| End bp | 2166036 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238382 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | NP_520109 |
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| Protein GI | 17546707 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.378872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.141872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAACA AGGACAAACG CATGACCAAA ATTGCAGTGT TGCCGGGTGA CGGCATTGGC
ACGGAAATCG TGGCCGAGGC CGTCAAGGTG CTCAAGACGC TGGGCGAGAC GTTCGAGATG
GAAACCGCGC CCGTCGGCGG CGCCGGCTAC GAGGCCAAGG GTCATCCGCT GCCAGAGGAC
ACGCTCAAGC TCGCCAAGGA AGCCGATGCC ATCCTGTTCG GCGCCGTCGG CGACTGGAAG
TACGACACGC TGCCGCGCGA ACTGCGTCCC GAGCAGGCCA TCCTGGGCCT GCGCAAGCAC
CTGCAACTGT TCGCCAACTT CCGCCCGGCT ATCTGCTATC CGGAGCTGGC CGGTGCATCG
AGCATGAAGC CCGAAATCGT GGCGGGGCTC GACATCCTGA TCGTGCGCGA ACTGACCGGC
GATATCTACT TCGGCCAGCC GCGCGGCGTG CGTGCCGCAC CGGACGGCCT GTTCGCCGGC
GCGCGCGAGG GCTTCGACAC CATGCGCTAC AGCGAGCCGG AAATCCGTCG CATCGCGCAC
GTCGCCTTCC AGGCGGCGGC CAAGCGCGGC AAGAAGCTGT GCAGCGTCGA CAAGGCCAAT
GTGCTGGAGA CCTTCCAGTT CTGGAAGGAC ATTGTCACCG ACGTGCACAA GGAGTACCCC
GAGGTCGAGC TCTCGCACAT GTACGTGGAC AACGCCGCGA TGCAGCTGGT CAAGGCGCCC
AAGAACTTCG ACGTGGTTGT CACCGGCAAC ATGTTCGGCG ACATCCTGTC GGACGAGGCC
GCGATGCTGA CGGGCTCGAT CGGCATGCTG CCGTCGGCCT CGCTCGATGC CAACAACAAG
GGCCTGTACG AGCCGTCGCA CGGTTCGGCC CCGGACATCG CGGGCAAGGG CATCGCCAAC
CCGCTGGCGA CCATCCTGTC GGCGGCGATG ATGCTGCGCT ACACGCTGGG CAAGGCCGAG
CAGGCGGACC GCATCGAGAA CGCGGTCAAG AAGGTGCTGG CCCAGGGCTA TCGCACCGGC
GACATCCTGA CGCCGGGCTG CAAGCAGGTC GGTACGGTGG AGATGGGCGA CGCCGTGGTG
GCCGCGCTGT AA
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| Protein sequence | MHNKDKRMTK IAVLPGDGIG TEIVAEAVKV LKTLGETFEM ETAPVGGAGY EAKGHPLPED
TLKLAKEADA ILFGAVGDWK YDTLPRELRP EQAILGLRKH LQLFANFRPA ICYPELAGAS
SMKPEIVAGL DILIVRELTG DIYFGQPRGV RAAPDGLFAG AREGFDTMRY SEPEIRRIAH
VAFQAAAKRG KKLCSVDKAN VLETFQFWKD IVTDVHKEYP EVELSHMYVD NAAMQLVKAP
KNFDVVVTGN MFGDILSDEA AMLTGSIGML PSASLDANNK GLYEPSHGSA PDIAGKGIAN
PLATILSAAM MLRYTLGKAE QADRIENAVK KVLAQGYRTG DILTPGCKQV GTVEMGDAVV
AAL
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