Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1987 |
Symbol | asd |
ID | 1220827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2163510 |
End bp | 2164613 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637238381 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | NP_520108 |
Protein GI | 17546706 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.385129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0809556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAG GTCTCGTCGG TTGGCGCGGC ATGGTCGGCA GCGTGCTGAT GCAGCGCATG CAGGAAGAAA AGGATTTCGA CCTGATCGAT ACGGTGTTCT TCAGCACCAG CAATGCCGGC GGCAAAGCGC CGTCGTTCGC CAAGACGGAC GCCCCGCTGG CGGACGCCAA CGATATCGAC GCGCTCAAGC AGTGCGACAC CATCATCACC TGCCAGGGCG GTGACTACAC CACCGAGATC TTCCCGAAGC TGCGCGCCGC CGGCTGGAAC GGCTATTGGA TCGACGCCGC TTCGACGCTG CGCATGGAAG ACGACGCGGT GATCGTGCTG GACCCGGTCA ACCTGCAGCT GATCAAGGAC GCCGTTGCCC GCGGGACCAA GAATTTCATC GGCGGTAACT GCACCAACTC CATCCTGCTG ATGGGCGTGG GCGGCCTGTT CCGCGACGGG CTGGTCGAGT GGGTCAGCTC GATGACCTAC CAGGCTGCAT CGGGCGGTGG TGCCAACCAC ATGCGCGAAC TGCTCAAGGG CATGGGGGTG ATCCACCGCG AAGTGGAGGA AGAGCTGGCC AGCCCGGCCT CGGCCATCCT GGAGATCGAC CGCAAGGTTG CCAAGACCAT CCGCGAGGAC GTGCCGACCG AGTACTTCCC GGCACCGCTG GCCGGTGGCC TGATCCCCTG GATCGACAAG CAGCTCGACA ACGGCCAGTC CAAGGAAGAA TGGAAGGGCC AGGCTGAGGT CAACAAGATC CTGGGCACCG CCCGGACGAT TCCCGTGGAC GGCCTGTGCG TGCGGATCGG CGCGATGCGC TGCCACAGCC TGGGCCTGAC GCTCAAGCTC AAGCGCGACC TGCCGCTCGA AGAGATCGAG TCCATCATCC GTTCGGGCAA CCCGTGGGTG AAGTGGGTGC CGAACGAGCG CGGCATCACC GAACAGGAGC TGACGCCCGC GGCCATCACC GGCGGGCTGG ATATCGGCGT GGGCCGCGTG CGTAAGCTGA ATATGGGTCC GGAATATGTC AGCGCGTTCG TGATCGGCGA CCAGTTGCTC TGGGGTGCTG CCGAACCGCT GCGTCGGATG CTGCGCATTC TGCTGGGCAA GTGA
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Protein sequence | MKVGLVGWRG MVGSVLMQRM QEEKDFDLID TVFFSTSNAG GKAPSFAKTD APLADANDID ALKQCDTIIT CQGGDYTTEI FPKLRAAGWN GYWIDAASTL RMEDDAVIVL DPVNLQLIKD AVARGTKNFI GGNCTNSILL MGVGGLFRDG LVEWVSSMTY QAASGGGANH MRELLKGMGV IHREVEEELA SPASAILEID RKVAKTIRED VPTEYFPAPL AGGLIPWIDK QLDNGQSKEE WKGQAEVNKI LGTARTIPVD GLCVRIGAMR CHSLGLTLKL KRDLPLEEIE SIIRSGNPWV KWVPNERGIT EQELTPAAIT GGLDIGVGRV RKLNMGPEYV SAFVIGDQLL WGAAEPLRRM LRILLGK
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