Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1972 |
Symbol | phaP |
ID | 1220812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2147099 |
End bp | 2147590 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238366 |
Product | putative phasin protein |
Protein accession | NP_520093 |
Protein GI | 17546691 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01841] phasin family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.170216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGC TCGAGCAACT CGGCTTTTTG CATCGCGCCC AATTGGAAGC TTGGCTGGCT GTGACGAAGG AGGCGGTCGA CGGCATCAAT CGGGTGATCG GTCTCAATCT CCAGGCGCTG AAGGCCGGGC TCGGCGAGAC GGAACAGTGC CTGCACGAGG TTGCCGGCGC GCAGGATGCC GGCCAGTGGT TCACCGCGCA TGTGCGCTAC CTGCAACCGG CGGGCGAGCG GGTCTCGGGC TATACGCGCA ACCTGGTGGA GATTGGCGTG CAGACGCAGA ACGGCATTGC CCAGGCGCTG CAGCGTCACG GCGACGAGGT GCGCCGCCAT TGGGGCGCTG TCACGGAAAA CCTTGTCGAC AGTGCGCCGC CGGGTTCGGA GGCGGTGGTG AGTCTGATGA AGGCGGCGGT CGGCTGGGAA GTCGCCGCGG CGGAGGTTGC GGAAGAACTG GTCATCGAAG AGGTTGGGGG CCAGCGTACC GAGTCGCGCT GA
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Protein sequence | MMTLEQLGFL HRAQLEAWLA VTKEAVDGIN RVIGLNLQAL KAGLGETEQC LHEVAGAQDA GQWFTAHVRY LQPAGERVSG YTRNLVEIGV QTQNGIAQAL QRHGDEVRRH WGAVTENLVD SAPPGSEAVV SLMKAAVGWE VAAAEVAEEL VIEEVGGQRT ESR
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