| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1921 |
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| Symbol | |
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| ID | 1220761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2100591 |
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| End bp | 2102255 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238315 |
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| Product | putative tail fiber-related protein |
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| Protein accession | NP_520042 |
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| Protein GI | 17546640 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5301] Phage-related tail fibre protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.526816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGA CCTTCTTCAT CGTTCCGACC GCCGCCGGCG AGGCAAAAGA CACCAACGCC
AAGGCACTCG GCCAGGCGCG CAAGTACACC CACATCGCCG TGGGCGACGG CGGCGGTGTG
CTGCCCACGC CCGACCGCGC CCGCGCCGCC CTGGTCAACG AGTGCTACCG CGCGCAGATC
AACGCGATTT GGCAGGATCA GGCCAACCCT GGCCAGTTCA TTGCCGAGCT GGTGATTCCC
GAGACCGTGG GTGGCTGGTG GGTTCGTGAG CTGGGCCTCA TCGACGCGGA CGGTACGCTT
GCTTACTACG GCAACTGCCC CGAGACGTAC AAGCCGCAGA TGGCCGAAGG CTCCGGCCGC
ACGCAGGTTG TGCGCATGGT CGTGCTGTCG GCCTCGGGCG CGGCCGTCGA GCTGAAGATC
GATCCGGCGA TCGTGCTGGC GACGCGGCAG TACGTCGACA CCACCATCGC CGCCGAGCTG
GCGAAGCTGG ACGGCAAGCC ATCGGTGCGC GTTGCCACCA CCGCCAACCT GGCCGCGCTC
TCCGGGCTGC TGACCATCGA CGGCGTGACG CTCGCCGCCG GCGACCGGGT GCTGGTCAAG
GACCAGAACG CGGGCAAGGA CAACGGCATC TACGTTGCGG CGGCCGGCGC CTGGGCGCGT
GCGGCCGATG CCGACGCGGC GCTGGAGGTG ACCCCCGGCA TGCTGGTGCC AGTCGAGGCG
GGGGCGGCCA ACGGCGATTC CCTGTGGCAG CTCGCCACCG ACGCGCCGAT CACGATTGGC
ACCACGGCGC TCGCCTTCGA GCTGGTGAGC GGCAAGACGG GCGTGGCGGC CGGCACGTAT
CGCAGCGTCA CCGTGAACAG CCGCGGCCAG GTCACCGGCG GCACCAATCC GACCACGCTT
GCCGGCTACG GCATCACGGA TGCCGTCACG GCCGCGCAGG GGCTGGCCGC CGGCATCGGC
GCTGACCTGG CGACCAGCAA CAAGGCTGCG GGCGACCTGA ACGCCCTAGT GGCGCCGGGG
GAGTACTACT ACACCAGCGA CAACGCCAAC GCGCCGAGCG GCCACGGCGT GCTCAAGGTA
TGGCGGGAGA GTGCGACGAT GGTTTTCCAG CTCGTCCACT CGTCGGACAA CGAAGTGTTC
ACGCGCTACC GCGCCAGCAG CGGCACTTGG ACCGCCTGGC GGCAACTGGT GGGCCAGGCG
GGGCTGATCG GGTACTTCGC GCGCTCCACC GCCCCGAACG GATGGCTCAA GGCCAACGGC
GCGGCGGTCA GTCGTACGAC CTACGCGGCG CTGTATGCCG AGATTGGCAC CACGTTCGGC
GCGGGCGACG GCGCCGCCAC GTTCAACCTC CCGGACCTGC GCGGCGAATT CCTGCGCGGC
TGGGATGACG GGCGCGGCGT GGATAGCGGC CGGGGCTTCG GCACGTGGCA GTCCGGGTCC
CCGGTCGTGC ATGACGACGT GGGCGGCATC GCCAGTTTCA ACATCACGGC GCTGGGCGAC
GGCACCAACG TGGCCTGGTC GAACATCGCC GACCCTTGGG TCGGCGCCTT CCCGCTCACG
ATGTACGACT CCTCGGCCGC AACCTTCGTT GATGCCAACA ACAAGGGGTT CATCAACATG
GCCCGCCCGC GCAACGTCGC GTTCCTCCCC TGCATCAAGT ACTGA
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| Protein sequence | MPQTFFIVPT AAGEAKDTNA KALGQARKYT HIAVGDGGGV LPTPDRARAA LVNECYRAQI
NAIWQDQANP GQFIAELVIP ETVGGWWVRE LGLIDADGTL AYYGNCPETY KPQMAEGSGR
TQVVRMVVLS ASGAAVELKI DPAIVLATRQ YVDTTIAAEL AKLDGKPSVR VATTANLAAL
SGLLTIDGVT LAAGDRVLVK DQNAGKDNGI YVAAAGAWAR AADADAALEV TPGMLVPVEA
GAANGDSLWQ LATDAPITIG TTALAFELVS GKTGVAAGTY RSVTVNSRGQ VTGGTNPTTL
AGYGITDAVT AAQGLAAGIG ADLATSNKAA GDLNALVAPG EYYYTSDNAN APSGHGVLKV
WRESATMVFQ LVHSSDNEVF TRYRASSGTW TAWRQLVGQA GLIGYFARST APNGWLKANG
AAVSRTTYAA LYAEIGTTFG AGDGAATFNL PDLRGEFLRG WDDGRGVDSG RGFGTWQSGS
PVVHDDVGGI ASFNITALGD GTNVAWSNIA DPWVGAFPLT MYDSSAATFV DANNKGFINM
ARPRNVAFLP CIKY
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