Gene RSc1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1919 
Symbol 
ID1220759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2099365 
End bp2099829 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID637238313 
Producthypothetical protein 
Protein accessionNP_520040 
Protein GI17546638 
COG category[S] Function unknown 
COG ID[COG3863] Uncharacterized distant relative of cell wall-associated hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.795239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCG TCCAGCTTCT TTTCACGACC ACCAACGGCC CCCTGAGCTG GGCGATCCGC 
GCGTGTTCCT GGTCGGCATG GAGCCATGTG GCCCTGGTGG CCGGCGACCA GGTCATCGAA
TCGATGCCCG GGCACGGCGT GCGCCGCGTG CCGCTGGCCG GGGCCATCGA GTGTGCGGAC
CGGCACGAGC TGGCGACGAT GCCGGCGCGC GACCCGGCGC GGATCATCGA GGCGGCGGCC
GGCCAGATCG GCAAGCCCTA CGACTACACC GCCGTGCTCG GCATCGGCCT GCACCGCGAC
TGGCAGCAGG CCGATGCGTG GTTCTGTAGC GAACTGCTGG CCTGGTCATT CCACCAGGCG
GGCGAGCCGC TGTTCCGCGC GGACTGTGTG CGGCGCGTGA CACCGCAGCA CCTGTGGATG
CTCGCGCCAC TCAATCAGCA GGCCTCGGCC AACGTCTTGT TGTAG
 
Protein sequence
MSGVQLLFTT TNGPLSWAIR ACSWSAWSHV ALVAGDQVIE SMPGHGVRRV PLAGAIECAD 
RHELATMPAR DPARIIEAAA GQIGKPYDYT AVLGIGLHRD WQQADAWFCS ELLAWSFHQA
GEPLFRADCV RRVTPQHLWM LAPLNQQASA NVLL