Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1919 |
Symbol | |
ID | 1220759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2099365 |
End bp | 2099829 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238313 |
Product | hypothetical protein |
Protein accession | NP_520040 |
Protein GI | 17546638 |
COG category | [S] Function unknown |
COG ID | [COG3863] Uncharacterized distant relative of cell wall-associated hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.795239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCG TCCAGCTTCT TTTCACGACC ACCAACGGCC CCCTGAGCTG GGCGATCCGC GCGTGTTCCT GGTCGGCATG GAGCCATGTG GCCCTGGTGG CCGGCGACCA GGTCATCGAA TCGATGCCCG GGCACGGCGT GCGCCGCGTG CCGCTGGCCG GGGCCATCGA GTGTGCGGAC CGGCACGAGC TGGCGACGAT GCCGGCGCGC GACCCGGCGC GGATCATCGA GGCGGCGGCC GGCCAGATCG GCAAGCCCTA CGACTACACC GCCGTGCTCG GCATCGGCCT GCACCGCGAC TGGCAGCAGG CCGATGCGTG GTTCTGTAGC GAACTGCTGG CCTGGTCATT CCACCAGGCG GGCGAGCCGC TGTTCCGCGC GGACTGTGTG CGGCGCGTGA CACCGCAGCA CCTGTGGATG CTCGCGCCAC TCAATCAGCA GGCCTCGGCC AACGTCTTGT TGTAG
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Protein sequence | MSGVQLLFTT TNGPLSWAIR ACSWSAWSHV ALVAGDQVIE SMPGHGVRRV PLAGAIECAD RHELATMPAR DPARIIEAAA GQIGKPYDYT AVLGIGLHRD WQQADAWFCS ELLAWSFHQA GEPLFRADCV RRVTPQHLWM LAPLNQQASA NVLL
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