| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1857 |
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| Symbol | |
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| ID | 1220695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2040079 |
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| End bp | 2041470 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238249 |
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| Product | putative transcription regulator protein |
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| Protein accession | NP_519978 |
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| Protein GI | 17546576 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.532766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0261786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCA TACAACACCG GAATGCAGGC CCTCAGTGGG ATCTGAGGAT CACCCGGACA
GGCGGTGCGA GGTATCTACA GATCGTCGAG TTCATCGAGC AGGCGATCGG CGACGGACGG
CTGGCCGCCG GAGACCGTGT GCCGCCGCAG CGCAGCCTGG CCAAGGCACT CGGGGTCGAT
CTCACGACGG TGACGCGGGC CTATACCGAA GCCAAGCGCC GCCACCTCAT CGATGCCCGG
GGGGCGCTCG GCACCTTCAT CGCTGCCCCG CGCGCGGAGC TTGCCCGGGT CGTGGACATG
AGCATGAACG TTCCGCCGCC GCCCGCCGGA CTGGACTTCC AGGACCTGCT GCGGCGAGGG
CTGTCGCAAG TCCTGCTGCA CAGCGACCCG CACCTGTTGA TGACCTACCA GCTCGGGGGC
GGCAGTCCGG CCGATCGCGC CGCCGGCGCA AACTGGTTGG CGCAGATCGT GGGGGCGGTC
GATGCATCGA GGCTGGTGGT CTGTCCCGGC GCGCAGGCGG CCCTCGCGGC CGTGATCCTG
AGCCACACAC GCCCCGGCGA TGCCATCGTC ACCGAGCCGC TGACCTACCC GGGGATCCGC
GCCGCGGCGG TCCAACTCGG CCGGCGTGTC CTCACGGTCG CGTGCGACGC GGATGGGATG
CGCCCCGACG CGCTTGAGGC GGCCTGCGCG CAGGGGGCCA GGCTGGCTTA TCTGAACCCG
ACGGCGCAGA ACCCGACCAC GCATACCATG CCGGCCGCGC GCAGGGCCGA CATTGCGCGA
ACGGCCGAAC GATGCGGCGT CACGATCCTG GAAGACGATC CCTACTGGCT GCTGACACCG
GACGCGCCGC CTCCGCTGGC CCATTTCGCG CCGGCGCAGA CGTACTACGT GTCGACGCTG
TCCAAAACCC TGAGTCCGGG ATTACGCACC GCCTACCTTC TGCTGCCCGC GGGAACGCGC
GGCGACGACC TGCTGGCGGC CCTTCGCGCA TTCGCCCTGA TGGCGGCCCC CGTGACCGCG
GCCCTGTCCA CGCAGTGGAT ACAGGACGGC TCGGCCCCGC AGTTGCTGGA CGGCATCCGC
ACGGAGGCCT TCGCGCGGCG TGAACTGGCA GACCGGTGGC TCAGCGGGAT CGGGCAGGCG
CCGCCGACAG GCATTCACGT GTGGCACCGT CTGCCAGACC ATTGGTCCAC GCACCAACTG
ACCCGCGCCG CACTGGCGGA AGACCTGCGT GTCACCCCGT CCGACGCTTT TTGCGATGGG
CCGAACCCGC CCAATGCGAT CCGCATCTCG CTGGGCGGCG TCGACGATCG GGCGCAGCTG
TCGCTGGCGC TGCGGAAACT GGCCGTCTTG CTGGAGCGCA AGCCGGCCAT CGGCGGGGAA
CTCGTGGTCT GA
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| Protein sequence | METIQHRNAG PQWDLRITRT GGARYLQIVE FIEQAIGDGR LAAGDRVPPQ RSLAKALGVD
LTTVTRAYTE AKRRHLIDAR GALGTFIAAP RAELARVVDM SMNVPPPPAG LDFQDLLRRG
LSQVLLHSDP HLLMTYQLGG GSPADRAAGA NWLAQIVGAV DASRLVVCPG AQAALAAVIL
SHTRPGDAIV TEPLTYPGIR AAAVQLGRRV LTVACDADGM RPDALEAACA QGARLAYLNP
TAQNPTTHTM PAARRADIAR TAERCGVTIL EDDPYWLLTP DAPPPLAHFA PAQTYYVSTL
SKTLSPGLRT AYLLLPAGTR GDDLLAALRA FALMAAPVTA ALSTQWIQDG SAPQLLDGIR
TEAFARRELA DRWLSGIGQA PPTGIHVWHR LPDHWSTHQL TRAALAEDLR VTPSDAFCDG
PNPPNAIRIS LGGVDDRAQL SLALRKLAVL LERKPAIGGE LVV
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