| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1796 |
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| Symbol | |
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| ID | 1220634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1931234 |
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| End bp | 1932265 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637238188 |
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| Product | putative N-acetylmuramoyl-L-alanine amidase protein |
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| Protein accession | NP_519917 |
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| Protein GI | 17546515 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.231571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.023487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA AAAATACACA GCCAGATGCA GTCGTGTACC CGGGGCGCCG CCATTTTCTG
GCGCGGACAC CGATCTGGTC AGCGAGCACA CTGGTATTGC CGCTTGCAGG GTGCGAAAGC
AGTCTCGCGC AGGAAGCACA AAATGCGGAA TACACCATCG ATGCATCGAT TCAGTCGCCA
AACCAGGATT CGCGCGTGCG CACGCTGGTA TTGCACTACA CCGCCGAATC GCTCGCTGAT
TCCATCGCAT CGCTGACCGA TCCACAGAAG CAGGTCAGTT CGCACTACCT CGTACCGGAT
GCCGCCAATG GCGGCGAGCG GTTCCGAATC TATTCACTCG CGCCGGAATC GCGTCGTGCA
TGGCATGCCG GCGTGAGCTA CTGGCAGGGC GAGCGGATGC TCAATGCGAG TTCCGTCGGC
ATTGAGGTGG TCAATCTCGG TTTTCCCGCG CAGGACGGAA ACGCACCCCT GATGAATCGC
CGCTGGTATC CGTACCCCGA TGCACAGATT GCAGTGGTCG GCCGACTTGC GGCTGACATC
GTCGCGCGGC ACGCAATCTT GCCGCGGAAA GTCGTCGGCC ACGCCGATAT CGCACCTGGG
CGCAAGCTGG ATCCGGGCCC CCTGTTCCCG TGGAAAACGC TGTATGAACA GTTCGGGATC
GGCGCATGGC CTGAAGCGGA AGCCATCCAC TATTACCAAA GCCATCAGCC GTTCCGCGGC
AACGTCGCCG AGCTGCAGGC GAAGCTGCTC GCCTATGGCT ACGACACGCC GCAGACCGGC
GTGCTCGACA CGCAAACCAT CAACGTTGTT GCCGCCTTCC AGATGCATTT TCGGCCCGAC
CGATACGATG GCGCGCCGGA TATCGAAACC GCGGCGATCC TCGATGCTCT GCTGGAAAAA
TATGTCCGCC GCGGACGACG CGCGCAGCAA CGCCAGGCGG TGCCCGGACA GCTCAGCCCC
CGGGGTGAGA AAGGCGACGA TATGTGGCCC ACGCCAGACA CGACCGGGCA GTCGAGCTCA
CCGTCCTTTT AA
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| Protein sequence | MSKKNTQPDA VVYPGRRHFL ARTPIWSAST LVLPLAGCES SLAQEAQNAE YTIDASIQSP
NQDSRVRTLV LHYTAESLAD SIASLTDPQK QVSSHYLVPD AANGGERFRI YSLAPESRRA
WHAGVSYWQG ERMLNASSVG IEVVNLGFPA QDGNAPLMNR RWYPYPDAQI AVVGRLAADI
VARHAILPRK VVGHADIAPG RKLDPGPLFP WKTLYEQFGI GAWPEAEAIH YYQSHQPFRG
NVAELQAKLL AYGYDTPQTG VLDTQTINVV AAFQMHFRPD RYDGAPDIET AAILDALLEK
YVRRGRRAQQ RQAVPGQLSP RGEKGDDMWP TPDTTGQSSS PSF
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