| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1785 |
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| Symbol | holB |
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| ID | 1220623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1920565 |
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| End bp | 1921575 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238177 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | NP_519906 |
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| Protein GI | 17546504 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.193634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.229083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTTT ATCCATGGCA ATCCGCTGAC TGGACGCGCC TGCAGGCCAT GCGGGCCAAG
CTGCCGCACG CCATCCTGCT CAGCGGCCAG GCCGGCACCG GCAAGCGCGA TTTCGCCATG
CACTTCGCGC AGGGGCTGCT GTGCGACACG CCCACCGCCG ACGGCCGGCC GTGCCAGACC
TGCGCCGCCT GCAACTGGTT CGCGCAGGGC AACCACCCGG ACTTCCACCT GGTGCGTCCC
GAGGCGATGG AAGACTCGCC CGACACCGAA AAGGATGCCG AAGGCAAGAA GAAGGCGCCC
AGCAAGATCA TCCGCATGGA GCAGGTGCGG CAGCTGATCG AGGCCATCGG GGTCGGCACG
CACCGGGCCG GGCTGCGCGT GGTGGTGCTG TATCCCCTCG ATGCGCTGCA GACCGAGGGC
GCCAATGCGC TGCTGAAGAC GCTGGAGGAG CCGCCGCAGG ACACCGTTTT CCTGCTGGTG
ACGGACCGCA TCGACCGCAT CCTGCCGACC ATCCTGTCGC GCTGCCGGCA ATTTCCGTTG
CAGCCGCCGC AGCCCGAGGC CGCCCGGCAG TGGCTGGAGG GGCAGGGCGT GCCGCACGCG
CAAAGCCTGC TGGCGGAATT CGGCAACGCG CCGCTGGCCG CACTGCAGGC CGCCGAATCG
GAAGAGCGTC CGCTGCTGCA ATTCCTGCTG GAACAGCTGG CCCAGGGCGC CAGGCTGGAT
GCGCTGGCAA CGGCCGACCA CCTGCAGAAA TTGTCGGTTC CGGCGGTTCT CAGTACCATG
CACCGGTGGA TCTTCGATCT GATGGCGGCG AGACTGGCGG GCCGTCCGCG GTATTTCCCC
GCGCAGCGCG ATGCCCTGCT GCGCTGCGCG GGCGCCATCC CGCTGGAGCG CCTGGAGCGG
TTCGCGCGGG CCTTGCCCGA GCGGCGGCGC ACCGAACAGC ACCCGCTGGC CGCGCGGGTC
GTCATCGAAA GCCTTTTGCT GGATTACCGG CAGCTCTTTC CGGCTGCCTG A
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| Protein sequence | MMLYPWQSAD WTRLQAMRAK LPHAILLSGQ AGTGKRDFAM HFAQGLLCDT PTADGRPCQT
CAACNWFAQG NHPDFHLVRP EAMEDSPDTE KDAEGKKKAP SKIIRMEQVR QLIEAIGVGT
HRAGLRVVVL YPLDALQTEG ANALLKTLEE PPQDTVFLLV TDRIDRILPT ILSRCRQFPL
QPPQPEAARQ WLEGQGVPHA QSLLAEFGNA PLAALQAAES EERPLLQFLL EQLAQGARLD
ALATADHLQK LSVPAVLSTM HRWIFDLMAA RLAGRPRYFP AQRDALLRCA GAIPLERLER
FARALPERRR TEQHPLAARV VIESLLLDYR QLFPAA
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