Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1741 |
Symbol | |
ID | 1220579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1863658 |
End bp | 1864653 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238133 |
Product | hypothetical protein |
Protein accession | NP_519862 |
Protein GI | 17546460 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.535544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC GCAAACAGAG GTCACGCCGT AAGACGGAAC AGGCGCCGGC CGGCACGCCA TCGACCGCCC AGCCGCCGCG CAGCGTCGAC GGCCTGCGCG AACTGGCGCT GCGCATCGGC CGCGACGAGG CCGACGTCTC GCTCGGCGGC AAAGCGCATA CCGTGCTGGC CAAGCTGATC GAGCGCCCGG AAGAAGTCGC GGTGCGCACC ATCACCGATC TGGCCGCCTC GCTCGGCATC AACGCCTCCA CGTTGACGCG CCTGGCCACC AGGCTGGGCT ATGCCGGTTT CGCCGACTTC CAGAACGTGT TCCGCGACAC CATGGCGCAG CGTCATCGCC ATTTCTACAG CCAGCAGGCC GAGCGGCTGG TGGCGGGCAA GAAGACGCGG GCGCGGGGGC ACCAGGCCGG CAGCGCCGCA CCGGAAGTCG AGACGGTGGC CCGGCTCGCG CGGGAGTCCA TCGGCAACAT CGAGCGGTGT CTCACGCAGC TCTCGCCGAC AGCCCTGCGC GAAGCCGCGC ACCTGCTCGC CAGCGCCCGG CGCGTGCGCA TTCACGGCCT GCGGCAATTC AGTGCGCTGG CAAGCTTCCT CTGCTATGGC CTCGGCATGA TCCGCGCCGA TGTCGCGCTG CTCGATACGC AGGGGCTGGG CGTGGCGGAA GGCCTGGCGC AACTGCAGCC GGGCGACGTG ATGGTGGTCA CGAGCGTGGC GCCGTACACG CGCAGCGTGG CCGCTGCCGC CGCAGCCGCC AAACAGGCCG GACTGTCGGT GATCGCGCTG ACCGACACGC TCGCCTCGCC GCTGGTACCG CCCGCGGATC ACGCCTTTCT CATTGCGCAC GAGAGCAGCT TCTTCAGCAA CAGCATGGGC GCGTATCTCG TCTTCTGCGA AGGGCTGCTC AATCTGGTGG CGACGCAGCT CGGCAAGCGT TCGCTGCAGG CGCTGGAGCG GCGCGAGCGC CTGATCACGG CGCTGGATAT CGAAATGTCG TCATGA
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Protein sequence | MDTRKQRSRR KTEQAPAGTP STAQPPRSVD GLRELALRIG RDEADVSLGG KAHTVLAKLI ERPEEVAVRT ITDLAASLGI NASTLTRLAT RLGYAGFADF QNVFRDTMAQ RHRHFYSQQA ERLVAGKKTR ARGHQAGSAA PEVETVARLA RESIGNIERC LTQLSPTALR EAAHLLASAR RVRIHGLRQF SALASFLCYG LGMIRADVAL LDTQGLGVAE GLAQLQPGDV MVVTSVAPYT RSVAAAAAAA KQAGLSVIAL TDTLASPLVP PADHAFLIAH ESSFFSNSMG AYLVFCEGLL NLVATQLGKR SLQALERRER LITALDIEMS S
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