Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1737 |
Symbol | |
ID | 1220575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1859247 |
End bp | 1860308 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238129 |
Product | putative transmembrane outer membrane porin signal peptide protein |
Protein accession | NP_519858 |
Protein GI | 17546456 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.172575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA CCTCGATGGC GCTGGCGGCG GCCGCGCTGG CGACCGCCGG CACCGCGGCG GCCCAATCCA ACGTGACCCT GTACGGCATC ATGGATGCCG GCATCGAATA CGTGAACCAC GCCGGCGCCA ACGGCGGCGG CGCGGCCCGC CTGGTGTCGG GCGGCAAGAA CACCTCGCGC TGGGGCCTGC GCGGCAGCGA AGACCTGGGC GGCGGGCTGA AGGGCATCTT CAACCTCGAG AGCGGCATCG CCATCGACAC CGGCCGGCTC GACACCGACA ACACGCTGTT CGACCGCCGC GCCGTGGTCG GGCTGGCGGG CAGCTTCGGC CAGGTGGTGT TCGGCCGCAC CTTCACCACC ACCTACGACT TCATGCTGCC CTACGACCCG ATGGGCTATG CGCCCAACTA CTCGTGGGCG ACCTCGTCGA CGGCCACCGG CGACCGCAAG GACGGCCTGT TCTCGCGCGC CTCCAACGCG GTGCGCTACG ACGGCACCTT CGGCGGCCTG AAGCTCGGCG CCACGGTCGG TTTTGGCGAG GTGGCGGGCA ACTTCAATAG CTCGTCCAAG TATGACGTGG GCATCGGCTA CAGCGCGGGC GGCTTCTCGG CGGCCGCCAC GTGGGACCGC CAGAACGGCG CCGGCACGAG CACCACGCCG GCCGACACCA CCGACTACAT CCAGGGCATC CACGCCGGCG CCAGCTATGA CTTCGGCGCG CTCAAGCTGT TCGCGGGCTA CCGCAACTAC AAGCGCGCCT TCACCACGGC CGCGGCCACG CAGCGCAGCG ATATGTACTG GGCCGGCGCC AGCTACGATT TCACGCCGGC GTTCACGCTG TTCGGCGCGG TCTACAAGCA GAACATCAAG GGCGGCACCG ATGCCGACCC GATCCTGTTC TCGCTGCGCG CGCAATACGC CTTGTCCAAG CGCACCACGG CCTACCTGGC CGGCGGCTAC GCCAAGGCGA GGAACGGCCA GAACGTAAGC CTGTCGCGCG ATGTGGCCGG CTTCGGCAAC AGCCAGGTCG GCGTGACGGC GGGCCTGCAG CACCGCTTCT GA
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Protein sequence | MKITSMALAA AALATAGTAA AQSNVTLYGI MDAGIEYVNH AGANGGGAAR LVSGGKNTSR WGLRGSEDLG GGLKGIFNLE SGIAIDTGRL DTDNTLFDRR AVVGLAGSFG QVVFGRTFTT TYDFMLPYDP MGYAPNYSWA TSSTATGDRK DGLFSRASNA VRYDGTFGGL KLGATVGFGE VAGNFNSSSK YDVGIGYSAG GFSAAATWDR QNGAGTSTTP ADTTDYIQGI HAGASYDFGA LKLFAGYRNY KRAFTTAAAT QRSDMYWAGA SYDFTPAFTL FGAVYKQNIK GGTDADPILF SLRAQYALSK RTTAYLAGGY AKARNGQNVS LSRDVAGFGN SQVGVTAGLQ HRF
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