| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1720 |
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| Symbol | |
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| ID | 1220558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1839669 |
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| End bp | 1841264 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637238112 |
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| Product | hypothetical protein |
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| Protein accession | NP_519841 |
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| Protein GI | 17546439 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.240927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC ACCCTACCTG GCGCGACGTC CTCACGGACG GCATCCTCGC CGAACGCCAT
GGCGCCGACC TGCTGTTCGG CAGCGCCGCT GTCCGCGCGC TCGAAACCGC CGCCTACCGC
GCGCTCGCGC CCTTCACGCT GATGGCCCGC GCCGGCGAGG CCGCCGCCGA CTGGCTGCAG
GCGCGCGCGC CGCGCGGCCA TCTGCTGCTG GTTGCCGGCC CGGGCAACAA CGGCGGCGAT
GCGCTGGTCG CCGCCACCGC GCTGCACGAG GCCGGGCGCA CCGTCACGGT CTGGCTTGCC
GCCGACCCGG CCCGCCTGCC CGACGACGCC CGCCGCGCCT GGACCGAAGC CCGCGCGGCC
CACGTCCCGA TCGAAATCCT GCACGCGCCC GCGTCTGTCC CCGCCACCGT CACGGCCATC
GTCGACGGGC TGTTCGGGAT CGGCCTGGCG CGGCCGCTCG CCGGGCTGCA TGCCGCGCTG
GTCGAGACCC TCAACGGCAG CGGACTGCCC GCCTACGCAC TCGACATCCC GTCCGGCCTG
TCCGGCGACA CGGGCCAGCC ACCCGCGCCG GATTCGCCGG TGGTGCGTGC GCGCGCCACG
CTCACTTTCC TGGTCGCCAA GCCCGGGCTG CTCACCGGCG CGGGCCGCGA CGCCACCGGC
GATCTCGCCC TGGCCGACCT GCTGGCCGCC CAGCCCGCCT ACGACGGCGT GGTGGAGGCC
GACGCGCTGG TCAACGCGCC GGCGCGCTGG CTCGCTCACC TGCCGCGGCG GCGCCACGAC
GGCCATAAGG GGACGTACGG CAGCGTCGCC GTCGTCGGCG GCGCGCACGG GATGGTCGGC
GCGCCGCTGC TGTCGGCGCG CGGCGCGCTG CACCTGGGCG CCGGCAAGGT CCACGTGGTC
TCGCTGGCCG ACGACGCGCC GCGCGTGGAT TTCGCGCAGC CCGAACTGAT GCTGCACACG
TGGGGCACCC TGGACCTGGG CGGCATGCAG GCGCTCGCCG TCGGCCCCGG CATGGGCACC
GGCAAGGACG CCTACGAGGC GCTGGACCAC CTGCTCGACC GCATGCTGCC CGCGCGCATC
GCCGCCGTCT TCGACGCTGA CGCGCTCAAC CTCTTTGCCC GTGCCCCGGC CCTGCTCACC
CGCCTGACGC GGCTTGCCTC CGGCGGCGCG CCCGTCGTGC TGACACCGCA TCCGCTCGAA
GCCGCGCGCC TGCTCGACAC CGACGCCCCC ACCGTGCAGC GCGATCGACT GGCCGCGGCC
CAGGCCCTGG TCAACCGCTG CGGCGCGGTG GTCGTGCTCA AGGGCTCGGG CACCGTCGTC
GCCGCGCCGG GCGTACCGCC GACCGTCAAC CCCACCGGCA ACGGCAGCCT GGCCACCGGC
GGCACCGGCG ACGTGCTGAC CGGCATGATC GGCGCCTTGC TGGCGCAGGG CGTGCCGGCG
CGCGAAGCGG CGCTGGCGGC CGTCTGGCTG CACGGCCGCG CCGCCGATGA CCTCGTCGCC
GCCGGCGAAG GCCCCATCGG GCTCCATGCC GGCGAGCTGT GCGCACCGGC GCGCCGCGCC
CTCAACGGGC TGCTGAAATC AGACGCCTAC CCATAG
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| Protein sequence | MSAHPTWRDV LTDGILAERH GADLLFGSAA VRALETAAYR ALAPFTLMAR AGEAAADWLQ
ARAPRGHLLL VAGPGNNGGD ALVAATALHE AGRTVTVWLA ADPARLPDDA RRAWTEARAA
HVPIEILHAP ASVPATVTAI VDGLFGIGLA RPLAGLHAAL VETLNGSGLP AYALDIPSGL
SGDTGQPPAP DSPVVRARAT LTFLVAKPGL LTGAGRDATG DLALADLLAA QPAYDGVVEA
DALVNAPARW LAHLPRRRHD GHKGTYGSVA VVGGAHGMVG APLLSARGAL HLGAGKVHVV
SLADDAPRVD FAQPELMLHT WGTLDLGGMQ ALAVGPGMGT GKDAYEALDH LLDRMLPARI
AAVFDADALN LFARAPALLT RLTRLASGGA PVVLTPHPLE AARLLDTDAP TVQRDRLAAA
QALVNRCGAV VVLKGSGTVV AAPGVPPTVN PTGNGSLATG GTGDVLTGMI GALLAQGVPA
REAALAAVWL HGRAADDLVA AGEGPIGLHA GELCAPARRA LNGLLKSDAY P
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