| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1698 |
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| Symbol | |
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| ID | 1220534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1814170 |
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| End bp | 1817325 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238088 |
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| Product | bacteriophage protein |
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| Protein accession | NP_519819 |
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| Protein GI | 17546417 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4733] Phage-related protein, tail component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0606223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0762686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA TCATCGGCTA CGGTGGCGGC AAGGGCGGCA GCAGCAGTAG CACGCCGACC
GAAGCGCCGG ACAGCCTGCA CTCGGTCGCC TATGCGCGCG TGCTGGATCT CGTCTCCGAG
GGCGAGATCG CGGGCCTGGT CAACGGCCTG CAGAGCATCT ATCTCGAGGG CACGCCGCTG
GCCAACGCCG ACGGCACGCT CAATTTTCAG AATGTGGCCG TCGACTACCG CCCGGGCTCG
CAGGATCAGG AGGCCATTCC CGGCTTCCCC TCGGTGGAGA GCGAGAGTGC TGTCGGTGTC
GAGCTGACCG CGACCATGCC CTGGGTGCGT GCGATCGCGA ATACGCAACT GTCGGCGGTG
CGCGTGCAGC TGTCGGTGCC GGCGCTGTCG CGCGCGGACA CCAGCAGCGG GAATATCAAT
GGCTACCGGG TCGAATATGC GATCGACCTG GCTGTCGACG GCGGTGCGCT GCAGCAGGTG
CTGGCCACCG CGTTCGATGG CAAGACGACC AGCAAGTACA CGCGCACGCA CCGCATTGAG
CTGCCGCGCG CGAAAACCGG CTGGACGATC CGCGTGCGCC GCATCACGCC TAACGCGAAC
AGCGGCACGA TCGCCGACGT GACGCGAATC GAATCGATCG CCGAGGTGAT CGACGCCAAG
CTGCGTTACC CGAATTCGGC GCTGATTGGC GTGCGCATCG ATGCGCGCCA GTTCAGCAGC
GTGCCGACCC GGTCGTATCA CTTGCGCGGC CGCATCATCC GCGTGCCGAG CAACTACGAT
CCGGCCACGC GCACCTACAC GGGGCTGTGG GATGGCACGT TCAAGGTGGC CTACAGCAAC
AACCCCGCAT GGGTTTTCTA TGACATCGTG CTGCACAAGC GGTGCGGCCT GGGCGACCGC
GTAAGTGCGG ACATGGTCGA CAAGTGGGCG CTGTACCAGA TCGGCCAATA CTGCGACGAG
CTGGTGCCCG ACGGGCGAGG CGGGCAGGAA CCGCGCTTTA CCTGCAACTG CTATCTCCAG
CAGCGCAACG ATGCTTACCC CGTCCTGCAG GACCTGGCCA GCGTGTTTCG TGGCATGGCC
TACTGGGCGT CGAGCAACGT GGTCGCGGTG GCGGACATGC CGGCGTCCGC TTCGTACCTG
TTCCACCCGG GCAACGTGGT CGACGGGCGG TTCACCTACG CCGGCAGCGC CAGGCGGGCC
CGGAAGACGG TGGCGCTCGT CTCGTGGAAC GATCCGGGCG ACCAGTACCG CGCCAAGGTT
GAGCATGTCG AGGATGGCGA CGGCATCGCG CGATACAGCA TCCAGCAGAC CGAGGTGACC
GCGTTCGGCT GCACCTCGCA GAGCCAGGCG CAGCGCGTCG GCCAATGGAT TCTGCTAACC
AGTCGACTTG AAACCGAGAC GGTCTCATTC AAGGTCGGGC TCGATGCTGC AGTAGTCATG
CCGGGCGCGA TTATCGAGGT CGCGGACCCG GCGCGCGCGG GCCGGACCAA CGGTGGCCGC
GTCCGCTCGG CAGATGGCCG GACGGTGGTG GTTGACCGGC CGGTGGTGGT CAGGGAGGGC
GATACCTTGC TGCTGAACCT GCCGGACGGC ACCGCGCAGC GGCGGACCAT TTCCCGCGTC
GACGGGCAGA GCCTGACCGT CTCGGCCGAC TGGTCGCAGC CGGTGCAGGC GGAGGCGGTG
TGGTCGGTCG AGAGCGCGGA TCTGAAAACC CAGCTGTTCC GGGTGGTGTC GGTAACGGAA
AGCGACGGCC TGACGTTCGA CATCTCGGCG CTCGAGTACA ACCAGTCGAA ATTCTCGGCC
ATCGACAACG GCACGCGCAT CGAGGCGCGC CCGGTGTCGG TGCTGCCGCC GTCGGTGCAG
CCGGCGCCGA CAGATGTGAC GCTGGCCACG TACAGCGTTG TCGATCAGGG CATTGCCATC
ACGACGATGA TGGTCGCGTG GCAGCAGGCC GCCAGCGCGG TCGCCTACAC GGTCGAATGG
CGGCGGGACA ATGGCGAATG GGTGACGGCC GGCCGCACGG GCTCGCAGAG CCTCGAGGTG
CGCAACATCT ACGCCGGCAC CTACGTTGCT CGGGTGCGCG CGATCAACGC GCTCGATGTG
GCGTCGCTGC CGGCCTATTC GGCGGAGACC CGGCTCACCG GCAAAACCTC GCCGCCGCCG
GTGGTGGGCA CGCTGATCGC CACGGCCATC GTGTTCGGGA TCCGACTGGA CTGGGCATTC
CCGACCGGCC CGCTCGATGT GGAGCGGACC GAGCTCTGGT GGAGCAAAGC ACCGGATCGA
GCGTCGGCGA CCAAGCTGGG CGATTTCGCG TTCCCCGCGA ACACGCACAC GCTGATGGGG
CTGGCGGCTG GCGCGACGTT CTATTTCTGG GCGCGTCTGG TCGACAAGTC CGGCAATGTG
GGCGCGTGGT ACCCGTCCGG TAACGGTGTG CTGGGCATGA GCAGCGATCG GGCCTCCGAC
ATCCTCAGCT ACATGAAAGG CCAGATTGGC AAAACGCAGC TCGCTGGTGA CCTGCTGTCG
GCGGTTGATT CGATTGATCC GCCGATGGCG GGCAGCGATG AGGATTTTGC CGGCGACGGC
ACCGTCTACG CCGGGATCGT GTCGACGCAG TCGGTGCTGG AGGAGGCCAA CCGCGCGATC
GCGCAGCAGG TGACGACCAT GCAGGCTACG GTCGCGCAGA GCAGTGCGGC GGTGCAGGTG
GCGCAGCAGG CGGTCGCCGA GCAGGGCGGC CGGCTGGCGG CGATGTACAC CATCAAGACG
CAGATCGCTG CCAACGGCCG GATCTACCTG GCCGGGATCG GCTTCGGCGT CGAGAACGAC
AAGGGTGTCA TTGAAAGCCA GGTACTGATC GCCGCCGACC GATTCGCGGT GCTGCATCCG
AACGGCAACA ACGTGTTTAC GCCGTTCGTG GTGCAGGGTG GCCAGGTGTT CATGGATTCG
GCGTTCATCG CTGACGGCAC GATCACCAGC GCCAAGATCG GCGACTCGAT CCAGTCGAGC
AATTTCGTTG CGGGGCAGAC TGGGTGGAGG CTCAGCAAGT CGGGCCTGTT CGAAAACAAC
GGCAATGGCG CCGGCGGCCG GCGCGTCGAC ACCAGTGCGC TCACGCAGAT CTACGACGCA
AACGGCACTC TGCGGGTGCG CCTGGGGGTG TGGTGA
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| Protein sequence | MRNIIGYGGG KGGSSSSTPT EAPDSLHSVA YARVLDLVSE GEIAGLVNGL QSIYLEGTPL
ANADGTLNFQ NVAVDYRPGS QDQEAIPGFP SVESESAVGV ELTATMPWVR AIANTQLSAV
RVQLSVPALS RADTSSGNIN GYRVEYAIDL AVDGGALQQV LATAFDGKTT SKYTRTHRIE
LPRAKTGWTI RVRRITPNAN SGTIADVTRI ESIAEVIDAK LRYPNSALIG VRIDARQFSS
VPTRSYHLRG RIIRVPSNYD PATRTYTGLW DGTFKVAYSN NPAWVFYDIV LHKRCGLGDR
VSADMVDKWA LYQIGQYCDE LVPDGRGGQE PRFTCNCYLQ QRNDAYPVLQ DLASVFRGMA
YWASSNVVAV ADMPASASYL FHPGNVVDGR FTYAGSARRA RKTVALVSWN DPGDQYRAKV
EHVEDGDGIA RYSIQQTEVT AFGCTSQSQA QRVGQWILLT SRLETETVSF KVGLDAAVVM
PGAIIEVADP ARAGRTNGGR VRSADGRTVV VDRPVVVREG DTLLLNLPDG TAQRRTISRV
DGQSLTVSAD WSQPVQAEAV WSVESADLKT QLFRVVSVTE SDGLTFDISA LEYNQSKFSA
IDNGTRIEAR PVSVLPPSVQ PAPTDVTLAT YSVVDQGIAI TTMMVAWQQA ASAVAYTVEW
RRDNGEWVTA GRTGSQSLEV RNIYAGTYVA RVRAINALDV ASLPAYSAET RLTGKTSPPP
VVGTLIATAI VFGIRLDWAF PTGPLDVERT ELWWSKAPDR ASATKLGDFA FPANTHTLMG
LAAGATFYFW ARLVDKSGNV GAWYPSGNGV LGMSSDRASD ILSYMKGQIG KTQLAGDLLS
AVDSIDPPMA GSDEDFAGDG TVYAGIVSTQ SVLEEANRAI AQQVTTMQAT VAQSSAAVQV
AQQAVAEQGG RLAAMYTIKT QIAANGRIYL AGIGFGVEND KGVIESQVLI AADRFAVLHP
NGNNVFTPFV VQGGQVFMDS AFIADGTITS AKIGDSIQSS NFVAGQTGWR LSKSGLFENN
GNGAGGRRVD TSALTQIYDA NGTLRVRLGV W
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