Gene RSc1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1680 
Symbol 
ID1220516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1797957 
End bp1798331 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content69% 
IMG OID637238070 
Productphage phi-105 holin-like protein 
Protein accessionNP_519801 
Protein GI17546399 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.376636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCA AGGCACCGCG CCCGTGCCGT GTGCCGGGCT GTCCCAAGTA CGCCGCACCC 
GGCGGCGCCT ACTGCGAGGA ACACGCGGTC CAACGGCACG AGACAGAGGT TGCCCGCCGT
GGCACAGCTG CGAGTCGCGG CTACGGATCG AAGTGGCAGC GCGAGCGGCT CGAGTACCTG
AAGCGCAACC CGATCTGCGT GGAGTGCAAG AGGGGTGGCC ACGTGGTGCC GGCCAAGGTT
GTCGACCACA TCGTGCCGCA CAAGGGCGAT CAGCATCTGT TCTGGCGCCG CAGCAACTGG
CAGGCGCTGT GCAAGACGTG CCACGACCGC AAGACGGCGC GCGAGGACGG CGGGTTCGCC
AACCCGAGGC GCTGA
 
Protein sequence
MPPKAPRPCR VPGCPKYAAP GGAYCEEHAV QRHETEVARR GTAASRGYGS KWQRERLEYL 
KRNPICVECK RGGHVVPAKV VDHIVPHKGD QHLFWRRSNW QALCKTCHDR KTAREDGGFA
NPRR