Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1634 |
Symbol | |
ID | 1220469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1755637 |
End bp | 1756191 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637238023 |
Product | hypothetical protein |
Protein accession | NP_519755 |
Protein GI | 17546353 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.374685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA GCAAGAAGGG CGCCGAACGG CTGATCAAGA AATATCCCAA TCGCCGGCTC TACGATACCC AGACCAGCAC GTACATCACG CTGGCAGACG TCAAGCAGCT CGTGATGGAA ACCGAGGAAT TTCGCGTGGT CGACGCGAAA AGCGGTGAGG ATCTGACCCG CAGCATCCTG CTGCAGATCA TCCTGGAAGA GGAAACCGGC GGCGTGCCGA TGTTCTCCGG CTCGATGCTG GCGCAGATCA TCCGCTTCTA CGGTAATGCC ATGCAAGGCA TGATGGGCAC GTACCTGGAA AAGAACATCC AGGCGTTCGT CGACATCCAG AGCAAGCTGG CCGAGAATTC GAAGGACCTC TACAGCGGCA ACACCTTCAA CCCCGACATG TGGTCGCAGT TCATGAACAT GCAGGGGCCG ATGATGCAGG GCATGATGAG CAACTACATC GAGCAGAGCA AGAACCTGTT CGTGCAGATG CAGGAGCAGA TGCAGAACCA GGCCAAGAAC ATGTTCGGGA CCTTCCCGTT CAACCAGCCG ACCGACAAGA AGTAA
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Protein sequence | MATSKKGAER LIKKYPNRRL YDTQTSTYIT LADVKQLVME TEEFRVVDAK SGEDLTRSIL LQIILEEETG GVPMFSGSML AQIIRFYGNA MQGMMGTYLE KNIQAFVDIQ SKLAENSKDL YSGNTFNPDM WSQFMNMQGP MMQGMMSNYI EQSKNLFVQM QEQMQNQAKN MFGTFPFNQP TDKK
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