Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1619 |
Symbol | pyrD |
ID | 1220454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1737914 |
End bp | 1738948 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637238008 |
Product | dihydroorotate dehydrogenase 2 |
Protein accession | NP_519740 |
Protein GI | 17546338 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase |
TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAACG CCCTGTATCC GCTTGCTCGC CCGCTGCTGT TTTCGATGGA CCCCGAAGAC GCGCACCACT TCACGCTGAA CCAGCTCAAG CGCGCGCATG CGCTGGGGCT GTCGGGCTGC ATCGGCGCGC GCGTGGCGCC GCAGCCCCGC ACGGTGATGG GCATCGCGTT CCCGAACCCG GTCGGGCTGG CGGCGGGCCT GGACAAGGAC GGCGCCTACA TCGATGCGCT GGGCGCGCTC GGCTTCGGCT TCATCGAAGT GGGCACCGTG ACGCCGCGCG CGCAGCCGGG CAATCCGCGG CCGCGCATGT TCCGGCTGCC GGCGGCGAGT GCGCTGATCA ATCGCATGGG CTTCAACAAC GGCGGCGTCG ATGCGTTCAT CCGCAATGTG CAGGCGTCGA AGTGGCGCGA GGCGGGCGGC GTGCTGGGCC TGAACATCGG CAAGAACGCC GACACGCCGA TCGAGCGCGC CGTCGACGAC TACCTGCACT GTCTGGAGCG TGTCTACCCG TACGCCAGCT ATGTGACGGT CAATATCTCG TCGCCGAACA CCAAGAACCT GCGCCAGCTG CAAGGCGCGA GCGAACTGGA TAGCCTGCTC GGCACGCTGC GCGGGGCGCA GCAGCGCTTG GCCGACCAGC ACAAGCGCTA CGTGCCGGTG GTGCTGAAGA TCGCGCCGGA CCTGGACGAT GACCAGATCG CCAACATTGG CGACGCATTG CTGCGCCATC GGATGGACGG CGTGATCGCC ACCAACACCA CGATCCGCCG CGAAGCCGTG GCCGGCCTGC CGCATGCGGA GGAGGCGGGC GGGCTGTCGG GGCAGCCCGT GCGGGAGGGC TCGACGCGCG TCATCCGCGC GCTGTGCGGC CTGCTGGGCG ATGCGGTGCC CATTATCGGC GTGGGCGGCA TCCTGGCCGG GGAGCATGCC CGGGAGAAGA TCGACGCCGG CGCGCAGCTG GTGCAGCTCT ACACGGGGCT GATCTACCGC GGCCCGGGCC TGGTGGCCGA GTGCGCGCGC GCCCTGGCAC GCTGA
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Protein sequence | MLNALYPLAR PLLFSMDPED AHHFTLNQLK RAHALGLSGC IGARVAPQPR TVMGIAFPNP VGLAAGLDKD GAYIDALGAL GFGFIEVGTV TPRAQPGNPR PRMFRLPAAS ALINRMGFNN GGVDAFIRNV QASKWREAGG VLGLNIGKNA DTPIERAVDD YLHCLERVYP YASYVTVNIS SPNTKNLRQL QGASELDSLL GTLRGAQQRL ADQHKRYVPV VLKIAPDLDD DQIANIGDAL LRHRMDGVIA TNTTIRREAV AGLPHAEEAG GLSGQPVREG STRVIRALCG LLGDAVPIIG VGGILAGEHA REKIDAGAQL VQLYTGLIYR GPGLVAECAR ALAR
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