Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1611 |
Symbol | |
ID | 1220444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1732146 |
End bp | 1732871 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237998 |
Product | hypothetical protein |
Protein accession | NP_519732 |
Protein GI | 17546330 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0746419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGTTG GCCTCTTCGT GACCTGCCTG GTTGACCTGA TGCGGCCCGA TATCGGTTTC TCGGTGCTCA AGCTGCTGGA GAAGGCCGGT TGCGAGGTGG TGGTGCCGCC GGCACAGACG TGCTGCGGCC AGCCCGCCTA CAACTCGGGC GATCGTCCGC TGGCGCGCGA TCTGGCCGAA AAGACACTCA AGGAGTTCGA ACAGTTCGAC TATGTCGTCG TCCCGTCGGG CTCGTGCGGC GGCATGATCC GCAAGCACTA CGCCGATCTC TTCCGCGACG ATCCCGAACT CGCGGGGCGC TACGAGCGCC TGGCGCCGCG CGTGTACGAG CTGACCGACT TTCTCGTCAG CGTAGCGGGC ATCGCCTCGC TCGATTCCGC ATTCCAGGGG CATGTGACCT ACCACGATGC CTGTTCGGGC CTGCGCGAGC TGGGCGTGAA GACGCAGCCG CGCGACCTGC TCGCCAAGCT GCCGGGCGTC AGGCTGACCG AGATGCCGGC CTGCGAGGCG TGCTGCGGCT TCGGCGGTAC GTTCTCGATC AAGTATGGCG ACATCTCCAC GGCCATCGCC GACGAGAAAT GCGCCAACAT CCGGGCTAGC GGCGCCGATG CCGTGGTGCT CGGCGACCTA GGCTGCATGC TCAATATCGA AGGCCGCCTG CGCCGCACCG GCGACACGCA GACACGCGTA CTGCATATCG CACAGGTCCT GGCCGGCGAC GCCTGA
|
Protein sequence | MRVGLFVTCL VDLMRPDIGF SVLKLLEKAG CEVVVPPAQT CCGQPAYNSG DRPLARDLAE KTLKEFEQFD YVVVPSGSCG GMIRKHYADL FRDDPELAGR YERLAPRVYE LTDFLVSVAG IASLDSAFQG HVTYHDACSG LRELGVKTQP RDLLAKLPGV RLTEMPACEA CCGFGGTFSI KYGDISTAIA DEKCANIRAS GADAVVLGDL GCMLNIEGRL RRTGDTQTRV LHIAQVLAGD A
|
| |