| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1609 |
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| Symbol | |
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| ID | 1220442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1729902 |
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| End bp | 1731029 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237996 |
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| Product | putative D-alanyl-D-alanine-endopeptidase (penicillin-binding protein) |
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| Protein accession | NP_519730 |
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| Protein GI | 17546328 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0138994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCG CGTTCACCGC CGCCTCCGTT GCCTCGTCCC ATGCCGTTGC GGCCGACAAG
GCTTCCGCTT CCGCCAAGAA ATCCGGCAAG TCCAAGAGCA AGATCCGCAA AGCCTCGACG
CAGGCCGCCG CCGATGATGG TGCCGGCGCC AAGATCCGCA AGGTCGTGAC CGTGAGGGGC
AAGCGCCATG TGATTCTGGT TGAGCGCGGT GCCCGCCCGA TGCGCGCCGC GTACGTGCCG
GCCGCGCCGA CGCTCGGCGA GGCGATGGGC CTGCGCGCCA CGCCGGATGC GCTGGCGCTG
CGCTCGTCGG TGGCGCTGGT GATGGACCAG GGTTCCGGCG ACGTCCTGTT CCAGAAGAAT
GCCTCGGCCG TGCTGCCGAT CGCTTCGATC ACCAAGCTGA TGACCGCGCT GGTCGTGACG
GATGCCCACC AGCCGATGGA CGAGCTGCTG GAGATCACCG AAGACGACCG CGACTTCGAG
CGCAATACCG GCTCGCGCCT GCGCTATGGC ACGATGCTCA CGCGCGAAGA CCTGCTGCTG
CTGGCACTGA TGTCGTCGGA AAACCGTGCC GCCTCGGCGC TGGGCCGTAG CTATCCGGGC
GGTCGCCCCG CTTTCGTTGC CGCGATGAAC CGCAAGGCGC ACGAACTGGG CATGACCGAC
ACGCACTATG TCGATTCGAA CGGCCTGTCG AGCAGCAATG TCTCCAGCGC GATGGACCTG
GCCAAGATCG TCATGGCTGC CTACAAGGTG CCCCTGATCC GCCAGTTCAC CACCACCGCC
GAGCACACCG TCAACGCCAA CGGCCGCACG CTGCACTACG TCAACACCAA CCGCCTCGTG
CGCGGCGGCG AGTGGGACAT CGGCCTGCAG AAGACCGGCT TCATCAACGA AGCCGGCCGC
TGCCTGGTGA TGCAGGCCAA TGTGCACGGC CGCAATGTGG TGATGGTGTT CCTGGATTCC
GCGGGCAACC TGACACGTTT TGCCGATGCC GTGCGCGTGC GCAACTGGCT CGAGCGCGCC
CCGCATGGCG AGGCACAAGC GGCAACGCAG GCTGCTGCGC CGCTGCGCAA CGTACCGGTG
TCGCAGCCGG CGACGGTGCT GGCTTCCGAG CAGACGCACG GTACCTGA
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| Protein sequence | MTVAFTAASV ASSHAVAADK ASASAKKSGK SKSKIRKAST QAAADDGAGA KIRKVVTVRG
KRHVILVERG ARPMRAAYVP AAPTLGEAMG LRATPDALAL RSSVALVMDQ GSGDVLFQKN
ASAVLPIASI TKLMTALVVT DAHQPMDELL EITEDDRDFE RNTGSRLRYG TMLTREDLLL
LALMSSENRA ASALGRSYPG GRPAFVAAMN RKAHELGMTD THYVDSNGLS SSNVSSAMDL
AKIVMAAYKV PLIRQFTTTA EHTVNANGRT LHYVNTNRLV RGGEWDIGLQ KTGFINEAGR
CLVMQANVHG RNVVMVFLDS AGNLTRFADA VRVRNWLERA PHGEAQAATQ AAAPLRNVPV
SQPATVLASE QTHGT
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