| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1600 |
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| Symbol | aceE |
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| ID | 1220433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1717310 |
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| End bp | 1720000 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237987 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | NP_519721 |
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| Protein GI | 17546319 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.160826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.690435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCG TACCAGAGCA AGTCCTGGGC GCCACGCGCG CCAGCGACGT CGATCCCCAG
GAAACCAAGG AATGGCTGGA GGCGCTGCAG GGCGTCATCG GCGCGGAAGG CCCGGACCGT
GCAGCGTTCC TGCTCGACAA GCAGCTCGAG TACGCGCGCA TCAACGGCGT GACCTCGCCG
CTGCATGCGG AAACCCCCTA TATCAATACG ATCCCGGTCG AGAACCAGGA GCGCATTCCC
GGCGACCAGG AAATCGAGCA CCGCATCCGC TCGTTCACGC GCTGGAACGC CATGGCGATG
GTCCTGCGCG CCAACAAGGA CACCAACGTC GGCGGCCACA TCTCGTCGTT CGCCTCGGCC
GCCACGCTGT ATGACGTCGG CTACAACCAT TTCTGGCATG CCCCGTCGGA CAAGCATGGC
GGCGACATGG TCTTCGTGCA GGGTCACTCG GCACCGGGCG TGTATTCGCG CGCGTTCCTG
CTGGGCCGCC TGTCCGAAGA TCAGCTCGAC AGCTTCCGCC AGGAAGTGGA CGGCAAGGGC
ATCTCGTCGT ATCCGCACCC GTGGCTGATG CCGGATTTCT GGCAGTTCCC GACCGTGTCG
ATGGGCCTGG GCCCGATCAT GGCGATCTAC CAGGCGCGCT TCACCAAGTA CCTGGCCAGC
CGCAGCCTGA TCCAGAACTT CGAGAACCGC AAGGTCTGGG CCTTCCTGGG CGACGGCGAG
ACCGACGAGC CGGAATCGCT GGGCGCGATC GGCATGGCCG GCCGCGAGAA GCTGGACAAC
CTGGTCTTCG TGATCAACTG CAACCTGCAG CGCCTGGACG GCCCGGTGCG CGGCAACGGC
AAGATCATCC AGGAGCTGGA GAGCGAATTC CGCGGCGCCG GCTGGAACGT CATCAAGGTC
ATCTGGGGCA GCCGCTGGGA TCAACTGCTC GCCCGCGACA CCAAGGGCCT GCTGATGAGC
CGCATGATGG AATGCGTCGA CGGCGAGTAC CAGACCTTCA AGTCGAAGAG CGGCGCCTAT
GTGCGTGAGT TCTTCTTCAA CACGCCGGAA CTCAAGGCCA TGGTGGCCGA CTGGTCCGAC
GACGACATCT GGGCGCTGAA CCGCGGTGGT CATGACCCGC ACAAGATCTT CGCCGCCTTC
AAGTCGGCCA CCGAGCACAA GGGCCAGCCG ACCGTCATCC TCGCTAAGAC CATCAAGGGC
TATGGCATGG GCGAGGCCGG CGAAGCGATG AACATCGCCC ACCAGCAGAA GAAGATGCCG
GTGGACGCCA TCCGCAAGCT GCGCGACCGC TTCAACATTC CGGTTGCCGA CGATCAGCTC
GAGCACGTTC CGTACGTCAA GTTCGAAGAA GGCTCGAAGG AACTGGAATA CATGCGCCGC
GCGCGCATGG ACCTGGGCGG CTACCTGCCG GCCCGCCGCC AGAAGGCCGA CGCGCTGCAA
GTGCCGGCGC TGGCTGCGTT CGACGCGCTG CTCAAGGCCA CTGGTGAAGG CCGCGAAGTG
TCCACCACGA TGGCCTTCGT GCGCATTTTG AACATCCTGC TGAAGGACAA GAACGTCGGC
AAGCACGTCG TGCCCATCGT CCCGGATGAG TCGCGCACGT TCGGCATGGA AGGTCTGTTC
CGCCAGGTCG GCATCTGGAA CCAGGAAGGC CAGAAGTACG TGCCGCAGGA CCACGACCAG
CTGATGTTCT ACAAGGAATC GCAGACGGGT CAGGTGCTGC AGGAGGGCAT CAACGAAGCC
GGCGCCATGT GCGACTGGAT CGCCGCCGCA ACGTCGTACT CGACGCACGG CGTGGCGATG
ATCCCGTTCT ACATCTACTA CTCGATGTTC GGCATCCAGC GCATCGGCGA CCTCTGCTGG
GCCGCCGGCG ACATGCGCTC GCGCGGCTTC CTGCTGGGCG GCACCGCAGG CCGCACCACG
CTGAACGGCG AGGGTTTGCA GCACGAAGAC GGCCACTCGC ACGTCTACCA CGCCGCCATC
CCGAACTGCA TCTCGTATGA CCCGACCTTC CAGTATGAAC TGGCGGTCGT GATGCAGGAC
GGCCTGCGCC GGATGTACGT CGAGCAGGAA GACGTCTATT ACTACCTGAC GGTGATGAAC
GAGAACTACG AGCACCCCGA AATGCCGGCG GGTGCCGAGG CCGACATCAT CAAGGGCATG
TACCTGTTCA AGAAGGGCGT CGAGAACAGC AACGCGCCGC GCGTGCAACT GCTGGGCTCG
GGCACGATCT TCCGCGAGGT GATCGCCGCG GCCGAGCTGC TCAAGAAGGA CTGGGGCGTC
GAGTCCGATC TGTGGGGCTG CCCGAGCTTC ACCGAGCTGG CCCGCGAAGG CAATGCCGCA
GCGCGCTGGA ACCTGCTGCA CCCGACCGAC GCGCCGCGCG AATCGCACGT CGAGAAGATG
CTCAAGGGCG TGCGCGGCCC GGTCATTGCT TCGACCGACT ACGTCCGCAC CTTCGCCGAG
CAGATCCGCG CCTTCGTGCC GCGCCGCTAC GTGGTGCTGG GCACCGACGG CTTCGGCCGC
TCGGACACCC GCGAAAAGCT GCGCCACTTC TTCGAGGTGG ATCGCTACTG GGTGACGGTC
GCGTCGCTCA AGGCGCTCGC CGACGAAGGC GTGCTGCCGC GCGAAAAGGT GGCCGAGGCG
CTCAAGAAGT ACAACCTCGA TCCCAACAAG CCCAACCCGA TGACCGTATA A
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| Protein sequence | MSAVPEQVLG ATRASDVDPQ ETKEWLEALQ GVIGAEGPDR AAFLLDKQLE YARINGVTSP
LHAETPYINT IPVENQERIP GDQEIEHRIR SFTRWNAMAM VLRANKDTNV GGHISSFASA
ATLYDVGYNH FWHAPSDKHG GDMVFVQGHS APGVYSRAFL LGRLSEDQLD SFRQEVDGKG
ISSYPHPWLM PDFWQFPTVS MGLGPIMAIY QARFTKYLAS RSLIQNFENR KVWAFLGDGE
TDEPESLGAI GMAGREKLDN LVFVINCNLQ RLDGPVRGNG KIIQELESEF RGAGWNVIKV
IWGSRWDQLL ARDTKGLLMS RMMECVDGEY QTFKSKSGAY VREFFFNTPE LKAMVADWSD
DDIWALNRGG HDPHKIFAAF KSATEHKGQP TVILAKTIKG YGMGEAGEAM NIAHQQKKMP
VDAIRKLRDR FNIPVADDQL EHVPYVKFEE GSKELEYMRR ARMDLGGYLP ARRQKADALQ
VPALAAFDAL LKATGEGREV STTMAFVRIL NILLKDKNVG KHVVPIVPDE SRTFGMEGLF
RQVGIWNQEG QKYVPQDHDQ LMFYKESQTG QVLQEGINEA GAMCDWIAAA TSYSTHGVAM
IPFYIYYSMF GIQRIGDLCW AAGDMRSRGF LLGGTAGRTT LNGEGLQHED GHSHVYHAAI
PNCISYDPTF QYELAVVMQD GLRRMYVEQE DVYYYLTVMN ENYEHPEMPA GAEADIIKGM
YLFKKGVENS NAPRVQLLGS GTIFREVIAA AELLKKDWGV ESDLWGCPSF TELAREGNAA
ARWNLLHPTD APRESHVEKM LKGVRGPVIA STDYVRTFAE QIRAFVPRRY VVLGTDGFGR
SDTREKLRHF FEVDRYWVTV ASLKALADEG VLPREKVAEA LKKYNLDPNK PNPMTV
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