| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1591 |
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| Symbol | hpaI1 |
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| ID | 1220424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1706911 |
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| End bp | 1707729 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237978 |
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| Product | putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase oxidoreductase protein |
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| Protein accession | NP_519712 |
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| Protein GI | 17546310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.365459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTC CGGTGAACCC TTTTAAGCGC GCGCTGGCCG AACGACGCCC GCAGATCGGC
CTGTGGCTGG CGATGGCGCA TCCATACCCC GCCGAGATTG TTGCCGGGGC CGGCTTCGAC
TGGCTGCTGA TCGACGGCGA GCACGCGCCC AACCAGCTGC AGTCGACGCT GGCGCAACTG
CAGGCGGTGG CGCCGTATCC CGCGCATCCG ATCGTGCGGC CGGCGTGGAA CGACGTGGTG
GAGATCAAGC GCCTGCTCGA CATCGGCGCA CAGACGTTGC TGATCCCGAT GGTGCAGAGC
GCGGAGGAGG CGCGCGCGGC CGTGGCGACG ATGCGCTATC CGCCCCACGG TAACCGGGGC
GTGGGCAGCG CACTGGCGCG GGCATCGCGC TGGAACCGCG TGGACGACTA CGTCCGCCGC
GCCGACGCCG AGATGTGCAC GCTGGTGCAG GTGGAAACGC CGCGCGGCGT CGAGCATCTG
GACGCCATCC TGGCTGTGGC GGGTGTCGAC GGTGTCTTCA TCGGGCCGGG CGACCTGGCT
GCGTCGATGG GGCACCTGGG CGAGCCGGGC CATCCGGAGG TGCGCCAGAC CATCGATCGC
ACCATCCGGC GCATCGTTGC GGCGGGCAAG GCGGCGGGTA TCTTGTCGGC CGATCCGGCG
CTGGCGCGGC ACTACCTGTC GCTGGGGGCG ACCTTTGTTG CCGTGGGGTC GGATGTCACG
CTGCTGGCCC GCAGCGCCGA GCAGTTGGCG CGGTCGTTCG CTGGCGCTGG CGCTGGCGCG
GGCGCACCCG TGCCGGGGCA GGCCGGCGCG GTGTACTGA
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| Protein sequence | MQLPVNPFKR ALAERRPQIG LWLAMAHPYP AEIVAGAGFD WLLIDGEHAP NQLQSTLAQL
QAVAPYPAHP IVRPAWNDVV EIKRLLDIGA QTLLIPMVQS AEEARAAVAT MRYPPHGNRG
VGSALARASR WNRVDDYVRR ADAEMCTLVQ VETPRGVEHL DAILAVAGVD GVFIGPGDLA
ASMGHLGEPG HPEVRQTIDR TIRRIVAAGK AAGILSADPA LARHYLSLGA TFVAVGSDVT
LLARSAEQLA RSFAGAGAGA GAPVPGQAGA VY
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