| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1588 |
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| Symbol | |
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| ID | 1220421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1703770 |
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| End bp | 1705200 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237975 |
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| Product | amino-acid transporter transmembrane protein |
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| Protein accession | NP_519709 |
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| Protein GI | 17546307 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.440422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGT TCCGTACCAA GAACCTGGAT CACATGATCC GCACCGGCCA GGGCGATACC
GGCCTGAAGA AAGTCTTCGG ACCGCTGGAC CTGACCTTCC TGGGGGTCGG CGCCATCATC
GGCACCGGCA TCTTCGTGCT GACCGGCACC GGTGCGCTGA CCGCGGGGCC CGCGCTGACG
CTGTCGTTCG TCGTTGCGGC GCTGGCATGC GGGTTTGCGG CGCTGTGCTA CGCCGAATTT
GCCTCGACCA TTCCCGTGTC GGGCTCGATC TATACCTATG CCTATGCCAC GCTGGGTGAA
CTGGTGGCCT GGATCATCGG CTGGGACCTG ATGCTCGAAT ACGGCCTGGC GACCTCGGCC
GTGTCGGTGG GCTGGTCGGG CTATTTCCAG TCGCTGATGG CGGGTTTCGG CCTGCATCTG
CCGGCGGCGC TGATGGCCGC ACCGGGGGCG ATTCCGGGCG TGCAGACGCT GTTCAACCTG
CCGGCGCTGC TGATCATGCT GATCATCACG GCGGTGCTGT CGCTCGGCGT GCGCGAGTCG
GCGCGGTTCA ACAACATCAT GGTGGCGATC AAGGTGGCGG TGGTGGTGCT GTTCATCGTC
GTCGGCGCGC GGCACGTGCA GCCGGCCAAC TGGCAGCCGT TCATGCCGTT CGGCATGTCG
GGCGTGTTCG GTGCCGCGGC CCTCGTGTTC TTTGCCTTCA TCGGCTTCGA CGCGGTGACT
GCCGCCGCGG AGGAGGTGCG CAACCCCGAG CGCGACCTGC CGATCGGCAT CATCGGCTCG
CTGGGCGTCT GCACGATCCT CTACGTGGTG GTGGCCGCCA TCATGACCGG CATCGTGCCG
TACACCAAGT TCGCCGGCGT TGACCACCCG GTGTCGCTGG CGCTGCAGAT GGGCGGCGAG
ACGTGGGTGG CCGGGTTTGT GGACCTGGGC GCCATCATCG GCATGACGAC GGTGATCCTG
GTGATGGGCT ATGGGCAGAC CCGCGTCATC TTTGCGATGT CGCGCGACGG CCTGCTGCCC
AAGCGCCTGT CGCGGGTCCA CCCGCGCTAT GCGACGCCGT TCTTCAATAC CTGGCTGGTC
GGCATCGTGT TTGCGCTGAT CGCCGCCTTT GTGCCGCTGA ACGTGCTGGC CGAGCTCATT
AACATCGGCA CGCTGGCCGC GTTTTCGCTG ATCGCGATCG CCGTGCTGGT CCTGCGCCGC
AAGCGCCCGG ACTTGCCGCG CGGCTTCCGC TGCCCGGGCG TGCCGTTCGT GCCGGCGGCG
GCCGTCGTGC TGTGCGTGTT CCTGATGAGC CAGCTGCAGG CCCTGACCTG GATCGCCTTC
GTGGTCTGGA TGGTGATCGG CCTGCTGGTG TATTTCGGCT ATGCGCGCAG CCGGTCGCTG
CTGCATGCGC CGGACCGTGC GGCGGTGCCG GGCTCCGAAG CGGCGCACTG A
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| Protein sequence | MSLFRTKNLD HMIRTGQGDT GLKKVFGPLD LTFLGVGAII GTGIFVLTGT GALTAGPALT
LSFVVAALAC GFAALCYAEF ASTIPVSGSI YTYAYATLGE LVAWIIGWDL MLEYGLATSA
VSVGWSGYFQ SLMAGFGLHL PAALMAAPGA IPGVQTLFNL PALLIMLIIT AVLSLGVRES
ARFNNIMVAI KVAVVVLFIV VGARHVQPAN WQPFMPFGMS GVFGAAALVF FAFIGFDAVT
AAAEEVRNPE RDLPIGIIGS LGVCTILYVV VAAIMTGIVP YTKFAGVDHP VSLALQMGGE
TWVAGFVDLG AIIGMTTVIL VMGYGQTRVI FAMSRDGLLP KRLSRVHPRY ATPFFNTWLV
GIVFALIAAF VPLNVLAELI NIGTLAAFSL IAIAVLVLRR KRPDLPRGFR CPGVPFVPAA
AVVLCVFLMS QLQALTWIAF VVWMVIGLLV YFGYARSRSL LHAPDRAAVP GSEAAH
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